Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0262 |
Symbol | |
ID | 4184026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 318959 |
End bp | 319513 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070272 |
Product | RNA polymerase sigma factor ( RNA polymerase sigma-24 factor) |
Protein accession | YP_676894 |
Protein GI | 110636687 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCCTT TAAATCTACA TACCGACACA ACTCCTTCTC TGTTAACCTT TTCAGATGTT AAGTCATTTG AAAAAATTTA CACGATGTAT TGGGCAAGGG TTTATGCAAC CTGTTATAAT ACGATTAAGG AGCGGGAAGT TGCCAAAGAA ATGGTTCAGG ATATTTTTAA ATCACTTTGG GAAAGAAAGG ATGAGCTCGA AATAAAAACT TCTGTTGAAC ATTATCTGGT ACGGGCCGCC AAATTTAAAG TGTTCGAATA CATCCGGAAT AAAACAAATC AAAAAAAGCA TACAGCCTGT GCACTGGAAG ATTATTGTTC GGCAACCAAC TGCACAGAAG ATGCTATTCT ATACAGCAAC CTTACAGAAA AAGTTGGCGT GTTAGTGGAC CGGCTTCCTT GCCAATGCCG GAATGTATAT ACTTTAAGCC GTACTGAAGG CTTAACAAAC AAAGAAATTG CCACCCGCTT ACTGATTTCT GAACGCGCGG TAGAACAGCA CATCACCAAA GCCCTGCGCT TCTTGCGGGA AAACCTGCAG GAGTATCGCT CCTAG
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Protein sequence | MSPLNLHTDT TPSLLTFSDV KSFEKIYTMY WARVYATCYN TIKEREVAKE MVQDIFKSLW ERKDELEIKT SVEHYLVRAA KFKVFEYIRN KTNQKKHTAC ALEDYCSATN CTEDAILYSN LTEKVGVLVD RLPCQCRNVY TLSRTEGLTN KEIATRLLIS ERAVEQHITK ALRFLRENLQ EYRS
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