| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0223 |
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| Symbol | atoS |
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| ID | 4185524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 272394 |
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| End bp | 274361 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638070232 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_676854 |
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| Protein GI | 110636648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.142406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0289163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TACATACCAG CTGCCGTAAC CAATTCTTCT ATTATATTAA GAAAAACTTA
ATACCAAAAA TCTTTTTATC TGCTTTATTT ATTTTTGTTT CAAGCATCTA TACATACGCG
CAGAATTCAT TGGAGCTTAA AGATGCGCCC TTATCTTACC CATTAAGAAG CGGCTTGATC
CACGTGTTTG AAGATACAGA CAACAGCTGT ACTTCTGTTG AAAGTGTTCA AACAAAAACA
TTCCGACCGG CAAATTCTTA TTTCTTTTCA ACACCAAACC CTTCTTCTAC TTATTGGGGA
AAATTCATTC TTACAGATAA TTCATCCATT AACAATCACT GGTTTTTTAT TTCTTATAAT
TACAGTATTG ATTCCCTCGA CATTTTTGCA TTCAAAAAAT CAACGCTGCA GTTCCATAAA
AAATACCGCT TTGGTTCTCC AAACGAAACC ACAAAAGAAA TTCGTCATAA AAATTTCACC
GTTGATTTTC CTGTCTCAAA AAATGATACG TTAACCGTAT ATATTAAATT AAAAAATAAA
AACGCGACAC AATATGACTT TGCCCTTGTA GAACATAAAG ATCTTTTTTC AAAAAGCGTT
TTTGAATTTT ATCTTTTCGG TCTCTTTTAT GGCGGACTGA TCATGATGGC TTTTTACCAC
ATCAGCGTTT ATTTTAGTTT AAAAGACAAA GCCTATATTT TTTATTCTAT CTATATTATA
TTTCAGGGGC TTTATATGAG TTACCGGGAT TCTACAGCAT TGGTAAACTT ATTTACCGAT
TCGCCCTGGC TTATTGATTA TACATTAAAT ATTTTATTCT TTCTGCTATC ATTTTCTTCT
TTACTATATG GACGCTTCTT CCTTGAACTG AATAGCTTCA AGTGGTATAA CATACTTACA
GTTGCATTTG TCGTTATCCG TTTCCCGTTT GTATGTATAT ATCACAATTA TCCGCTTGCG
CTTATGTGGT TTGATCTGGC GGCGCCGGTA ATTGTTTTTT TATTTTCTAT CATTTCACGT
TTTGAAAAAA ACAAAACTGC ATCCTTATTC AGCATTGGTT TTTTTGCCAT ATGTATCGGA
TATCTGATTA ATGTATTGTG GCATGCCAAT ATCATCGATT GTACAACGGA TGTATTCTAT
TCGCTTTACT ATACCATTAT CATCCAATCG TTGCTGCTTG CCATTGCGAA TGCCTACCGC
CTCAATAAAC TAAAGGCTGA TGCACTGAAT AAAAAAATGC TGGAAGAGAA AGTTATTGAA
AACAGCCGCA TGATTAAATA TCAGGAAGAA TTAATCAAGG AAAAAACAAA TGACCTGGAT
ATGCTTTTAT ACAGAGCTTC TCACGATATC AAAGGTCCCC TGAAATCAAT TAACGGCTTA
TGCGATCTGG GCCAGCGCGA CAATGAGAAT AAAAATATTT ATTTCGAACA TATTGATCTT
GTTTCAAAAA GACTGCAGAA TATTTTGAAT GCCCTTTTGC AGATTGCAGA ACACAATCGT
TCTGAAGTTA AAAAAGAACC TGTTTATATT CGTACGTTAA TACAGGAATG CGTACAGGAA
AACCTGGTTG CTTATCCGGA TATCAAAAAA ATCACCTTTA AGATAGATGT TCCGGAAGAT
GCGGTGATCA ACTCCGAACG GTTCACCTTA CTTTCTATCA TACAAAACAT TATTGAGAAT
GCGATTAAGT ACATGGACAA GTCGAAAGCA GAAAATCATG TATCTATAAG TTTTAATCAA
TCTGCCACTG AACATACGTT AATTTTTGAA GACAACGGAA TTGGAATTAA CGAAGTGTAT
CTGAAAAACA TTTTTCAAAT GTTTTACCGT GCAAACAATG TAAATCCTGC CGGTGTGGGG
CTTGGGCTTT ATATAGTAAA ACAGCATATT GACCGCTTAA AGGGGCACAT AGATATTGCT
TCTAAAGAAC ATGAATTTAC GCGGTTTACG ATCCGCTTAC CCAGATAA
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| Protein sequence | MKKIHTSCRN QFFYYIKKNL IPKIFLSALF IFVSSIYTYA QNSLELKDAP LSYPLRSGLI
HVFEDTDNSC TSVESVQTKT FRPANSYFFS TPNPSSTYWG KFILTDNSSI NNHWFFISYN
YSIDSLDIFA FKKSTLQFHK KYRFGSPNET TKEIRHKNFT VDFPVSKNDT LTVYIKLKNK
NATQYDFALV EHKDLFSKSV FEFYLFGLFY GGLIMMAFYH ISVYFSLKDK AYIFYSIYII
FQGLYMSYRD STALVNLFTD SPWLIDYTLN ILFFLLSFSS LLYGRFFLEL NSFKWYNILT
VAFVVIRFPF VCIYHNYPLA LMWFDLAAPV IVFLFSIISR FEKNKTASLF SIGFFAICIG
YLINVLWHAN IIDCTTDVFY SLYYTIIIQS LLLAIANAYR LNKLKADALN KKMLEEKVIE
NSRMIKYQEE LIKEKTNDLD MLLYRASHDI KGPLKSINGL CDLGQRDNEN KNIYFEHIDL
VSKRLQNILN ALLQIAEHNR SEVKKEPVYI RTLIQECVQE NLVAYPDIKK ITFKIDVPED
AVINSERFTL LSIIQNIIEN AIKYMDKSKA ENHVSISFNQ SATEHTLIFE DNGIGINEVY
LKNIFQMFYR ANNVNPAGVG LGLYIVKQHI DRLKGHIDIA SKEHEFTRFT IRLPR
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