| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0203 |
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| Symbol | ribD |
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| ID | 4185308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 249430 |
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| End bp | 250488 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070212 |
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| Product | bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_676835 |
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| Protein GI | 110636628 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.684774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCTG ATGAAAGATA TATGAGACGT GCACTGGAAC TGGCCATGCT GGGTTCCGGA
CACGTAAGTT CTAATCCGAT GGTTGGCTGT GTTGTGGTAA AAGACGGCCA TATTATCGGA
GAAGGTTATC ATGAAAAATT TGGGCAGCCT CATGCTGAAG TGCACGCCAT TCAGTCTGTA
CCAGATAAAT CTTTATTAGA AGGTTCTACC TTGTATGTAA ATCTGGAGCC CTGTTCACAT
TACGGTAAAA CACCTCCCTG CTCGCATTTG ATCGTTGATT ATAAAATAGC ACGGGTTGTT
TTCGCCAATA TTGACCCAAA TCCACTGGTT GCGGGGGCAG GCTTTGAATA CCTGATGTCA
AACGGTATTG AAGTAATTCA AGGTGTACTG GAAGAAGAAG GGCGAGAATT GAACCGTCGT
TTTTTTACCT ATATTGAAAA TAAGCGTCCA TATATCATTT TAAAATGGGC TGAAACAGCA
GATGGTTTCA TTGCAAAAGA AAATTTTGAT TCTAAATGGA TCAGCAATGA GCTGTCGCGA
AAACTTGTAC ATAAATGGCG TACTGAAGAA GATGTTGTAT TAATCGGCAC CAATACGGCG
CTGTATGATA ACCCTAGGTT GAATGTACGT GACTGGACAG GCAGAAACCC TGTACGGGCA
TTTATTGATA AGCAACTGCA AGTACCTGTT GGGGCGCATC TGTTAGACGG CAGCCAGGAA
ACAATTTGCT ACAATTATCA CGAACAGGAT GTACGTAACC TGGTAGAATA TGTAAAAGTA
GATCCGTTGG ATGATATGAT TGATGTGATT GCAGAGGATA TGTATGTGCG CAAACATCTG
TCCATACTTG TTGAAGGCGG CACACAATTA TTAAAATCAT TTTTGAAAAA AGGATTGTGG
GATGAGATTC GTATATTTCG TTCTCCGAAT GAATTTGGTG CCGGTATAGA ATCGCCGATT
GTACGTGCGA AAGCATTCAG TCAGGAAATG ATTTTAGATG ATACGCTGAT TGTATATAGA
AATAAAATTA AAGAGTATGA CGCTAGTCTC CACACTTAG
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| Protein sequence | MDSDERYMRR ALELAMLGSG HVSSNPMVGC VVVKDGHIIG EGYHEKFGQP HAEVHAIQSV
PDKSLLEGST LYVNLEPCSH YGKTPPCSHL IVDYKIARVV FANIDPNPLV AGAGFEYLMS
NGIEVIQGVL EEEGRELNRR FFTYIENKRP YIILKWAETA DGFIAKENFD SKWISNELSR
KLVHKWRTEE DVVLIGTNTA LYDNPRLNVR DWTGRNPVRA FIDKQLQVPV GAHLLDGSQE
TICYNYHEQD VRNLVEYVKV DPLDDMIDVI AEDMYVRKHL SILVEGGTQL LKSFLKKGLW
DEIRIFRSPN EFGAGIESPI VRAKAFSQEM ILDDTLIVYR NKIKEYDASL HT
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