Gene CHU_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0197 
Symbol 
ID4185576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp241992 
End bp242414 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content36% 
IMG OID638070206 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_676829 
Protein GI110636622 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCA AAAAAGCTAA ATATGCACTT AAGGCCCTGC TTTTTCTATC TAAAAATACG 
GATAGAGGTG TGGTTCTCAT TGCTGAAATT TCTGAAACAG AAGGCATTCC GAAAAAATTT
TTAGAACAGA TTCTACTTGA ATTAAAAAAA CAAGGCATTT TACAAAGTAA ACGCGGAAAA
GAAGGCGGCT ATTTTCTTGG AAAACCTGCA AATGAAATTG GAATTGGACA GGTAGTACGG
ATTATTGACG GACCACTGGC TCCAATACCT TGTGTAAGCA AAATGGCATA TCGCCGGTGT
GACGAATGTA TTGATGAGAA AACCTGTGAA ATCCGAAATT TATTTTTGCA AGTTCGTGAT
GCGACCATAG AAATTTTGGA TAAGACTTCT TTATCTGATC TGGAACAAAA AAATATTTTG
TAA
 
Protein sequence
MLSKKAKYAL KALLFLSKNT DRGVVLIAEI SETEGIPKKF LEQILLELKK QGILQSKRGK 
EGGYFLGKPA NEIGIGQVVR IIDGPLAPIP CVSKMAYRRC DECIDEKTCE IRNLFLQVRD
ATIEILDKTS LSDLEQKNIL