| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0130 |
|---|
| Symbol | ammA |
|---|
| ID | 4184071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 156861 |
|---|
| End bp | 158066 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638070133 |
|---|
| Product | N-acyl-L-amino acid amidohydrolase |
|---|
| Protein accession | YP_676763 |
|---|
| Protein GI | 110636556 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0750166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.238012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA AACAGCGCAT CCACCAGCTT GCAGCAGCTA TCTCAACCGA AGTTATAGGA
TATAGAAGAC ACATTCACGC CAATCCTGAA TTGTCTTTTG AAGAGTATAA TACATGCAGA
TATGTTTCCG GCTTACTCAC ATCCTTTGGC GTAAAGCATG AGACAGGTAT AGCGGGCACG
GGCGTTGTAG CGTTGATTGA AGGAAAAAAT CCAACATCAA AAGTAATTGC GTTGCGTGCA
GATATGGATG CACTTCCGAT CGAAGAAAAA AATGATGTGC CATATAAGTC TACAAACATA
GGTGTGATGC ATGCTTGTGG CCATGATGTA CATACATCTT CTTTATTAGG CACAGCTAAA
ATATTAAGTC AGGTTACAGA TCAGTTTGAA GGAACAATAA AATTAATTTT TCAACCCGGG
GAAGAAAAGT TTCCGGGCGG CGCTTCATTA ATGATCAATG AAGGAGTACT GGAAAACCCG
GCACCGGCAA ACATCATCGG ACAACATGTA ATGGCTTTGA TTCCTGCAGG CAAAGTAGGT
TTCAGAGAAG GTATGTATAT GGCAAGCGCC GATGAAATAT ACATTACAGT TAAAGGTAAG
GGCGGCCATG CTGCCATGCC GGATAAAAAT GTAGATCCTA TTTTAATTGC ATCACATATT
ATTGTAGCAC TTCAGCAAGT GATCAGCAGA AATTGCGACC CGCGTATTCC CGCTGTTTTA
TCATTTGGTA AAATTACAGG TATGGGTGCA ACCAATGTAA TTCCGGACGA AGTAAAGATT
GAAGGCACAT TCCGGACACT GAATGAAGAG TGGAGAGCAG AGGCAAAGCA GCGCATTAAA
AAAATGGCTG AAGGTATTGC AGAATCCATG GGTGCAACGT GCGAGATAGA TATAAAAGAT
GGATATCCAT TTTTAAAGAA TGCTCCTGCA CTGGCTAAAA GGATGCGCGA AGCAGCGATA
GATTTTTTAG GCAGCGAAAA TGTATTGGAT TTAGATTTGT GGATGGCTGC AGAAGATTTT
GCCTACTATT CGCAAAAAAT TGACGCGTGT TTTTATCGAT TAGGAATCCG TAACGACGAG
CGCGGTATTA CTTCAGGCGT CCATACCCCA ACGTTCGATA TTGACGAAAC GGCATTGCAG
ACAGGAACAG GTTTAATGGC ATGGTTGGCG TTGGAAGAAC TGAAGGTAAA TAATGCCAAT
TTATAA
|
|---|
| Protein sequence | MELKQRIHQL AAAISTEVIG YRRHIHANPE LSFEEYNTCR YVSGLLTSFG VKHETGIAGT
GVVALIEGKN PTSKVIALRA DMDALPIEEK NDVPYKSTNI GVMHACGHDV HTSSLLGTAK
ILSQVTDQFE GTIKLIFQPG EEKFPGGASL MINEGVLENP APANIIGQHV MALIPAGKVG
FREGMYMASA DEIYITVKGK GGHAAMPDKN VDPILIASHI IVALQQVISR NCDPRIPAVL
SFGKITGMGA TNVIPDEVKI EGTFRTLNEE WRAEAKQRIK KMAEGIAESM GATCEIDIKD
GYPFLKNAPA LAKRMREAAI DFLGSENVLD LDLWMAAEDF AYYSQKIDAC FYRLGIRNDE
RGITSGVHTP TFDIDETALQ TGTGLMAWLA LEELKVNNAN L
|
|---|
| |