Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0123 |
Symbol | ykgE |
ID | 4184064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 147354 |
End bp | 148142 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070126 |
Product | Fe-S oxidoreductase, dehydrogenase subunit |
Protein accession | YP_676756 |
Protein GI | 110636549 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.920784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATATA ACGTACCAAC CGTTGCTGAA TTGAAAGCAC AAGGCAAGAA TCCTGAAATC ATTTTCTGGG TAGGGTGTGC AGGCTCCTTT GATGATCGCG TTAAAGCTGT AACCGTAGCC TTTGTAAAAA TATTAAATCA CCTTCAGGTA AACTTCGCTG TTTTAGGTAC GGAAGAAGCC TGTACAGGAG ATCCTGCAAA GCGCGCCGGG AATGAATTCC TGTTTCAGAT GCAGGCAATG GCAAATATTG AAGTATTAAA CGGCTATGGT ATAACAAAGA TCGTTACTGC CTGTCCGCAC TGTTTCAATA CCCTTAAAAA TGAATATCCT GAATTAGGTG GCAATTACGA AGTGATCCAC CATTCACAAT TGCTTCAGCA ATTTATTGAC GAAGGAAAAA TCAAAATGAC TGAAGGCGGT GTGTTTAAAG GAAAAAAAAT CACCTACCAC GATTCCTGTT ATTTAGGAAG AGCCAATAAT ATTTATGAAG CGCCGCGTAA AGTACTTGAA GTGCTGGATG CAGATCTGGT AGAAATGAAG CGCTGTAAAA CTACCGGACT ATGTTGTGGT GCAGGTGGCG CGCAAATGTT TAAAGAGCCT GAAAAAGGAA CAAAAGATAT CAATATTGAA CGTACCGAAG AAGCCCTTAA TACAGGCGCT AAGGTAATTG CAGCAGCCTG TCCGTTTTGC ATGACCATGT TATCTGATGG TGTAAAAAAC AAAGAACAGG AACATGCCGT AAAAGTATAT GATTTAGCAG AACTAATCGC ACAATCTCAA GGTTTGTAA
|
Protein sequence | MEYNVPTVAE LKAQGKNPEI IFWVGCAGSF DDRVKAVTVA FVKILNHLQV NFAVLGTEEA CTGDPAKRAG NEFLFQMQAM ANIEVLNGYG ITKIVTACPH CFNTLKNEYP ELGGNYEVIH HSQLLQQFID EGKIKMTEGG VFKGKKITYH DSCYLGRANN IYEAPRKVLE VLDADLVEMK RCKTTGLCCG AGGAQMFKEP EKGTKDINIE RTEEALNTGA KVIAAACPFC MTMLSDGVKN KEQEHAVKVY DLAELIAQSQ GL
|
| |