Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0081 |
Symbol | |
ID | 4186332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 96533 |
End bp | 98224 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070081 |
Product | family X DNA polymerase IV |
Protein accession | YP_676715 |
Protein GI | 110636887 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.439053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0727641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAAATC AAGAAATTGC TGATATACTT TTACTGACGG CTTCGCTTAT GGAGCTGCAT GACGAAAACT CGTTTAAAGT TCGTTCCATT CAGAATGCCG GATTTCAAAT TGAAAAAACG GAAGTTGCTT TATTCGGCTT ATCGCTTCCT GAACTGGAAA AGCAGGACGG CATTGGTAAA AGCATTGCGG CAAAAATAGT TGAGCTGAGC CAGACAGGTA AACTGACAGA ACTTGAAACA CTGAAGCTCA ATACACCTGA AGGCATTGTT GAATTGCTGG ATATAAAAGG CATTGGACCG AAAAAAGTAA AAACGCTTTG GAAAGAACTT AACATCACGT GTAAGGAAGA GTTGCTGGAG TCTTGTAAAA CCAATGCTGT GGCTCAGCTG AAAGGCTTTG GCGAAAAAAC GCAGGAAAAT ATTATACAGG TGCTTCAATT TGTAATGAAG CAGTCTGACA AACATTTGTA TGGAGACATT GAAGCGCTTG CCTTTGAACT GGAACGTAAA CTTAAGGCAG ACATCAGCCC GCAGATTCAG CTGTGCGGAG ATGTGCGCCG GATGATGGAA ACAATTGACT GCATTTCTTT TGTTGTACCA AGTACCGATT TTGCTGAAAC CGTTTCTGTC TTGCAAACGC TTTCTTATTT ATCTGAAGAT CCTGCTAAGT CTGGCTTATA CAGATGGCGT GGAGCTGAAC GTTTAAAAAA CATTCCCGTT GAAATATATT TAACTACAGC AGAAAAATTC GGATCTGAAT TATTCAAACA TTCTTCCGGA GAAAAACATT TACGATTAAA AAGCCCATCC GGAAAAACAT TTTTACATCT TGCAACAACA ACTGCTTTTG CTACTGAAGC CGCATTGTAT GAACATGTTA ATCTTCCTGT TATTCCTTCT GAATTGAGAG AAGGTTACAG AGAAATGCAA TTAGCGACGA ATAATTTATT ATCCGAACTG ATTACCGATG CGGATATTAA AGGGAGCTTT CACAATCATT CCACCTATAG CGATGGCAAG CATACTCTGG AAGAAATGGC TAAAGAATGT ATGGCTTTAG GGTATGCATA TTTTGGCATT TCAGATCACT CAAAGTCTGC CTTCTATGCA AACGGCTTAG ATGAAACACG CATTGCCAGA CAACAGGCCG AAGTGGATGC CTTAACTATT TCATTGCCCG GCATTAAAAT TTTCAAGGGT GTTGAATCGG ATATTTTAAA CGATGGCTCA CTGGATTATG CAGATGAAGT ATTAAAAACA TTTGATTTTA TTGTCGCTTC TATTCATTCC AACTTAAAAA TGAATGAAGA AAAAGCCACG CAGCGTTTGA TTACAGCGAT CGAAAATCCC TATACAACCA TGCTGGGTCA TCCAACGGGC CGGCTATTAT TAAAGCGCGA AGGATATCCG ATTGACCATA AGAAAATTAT TGATGCCTGC GCAGCCAACA ATGTTATCAT TGAGATCAAT GCGCATCCAT GGCGCCTGGA TATGGACTGG CGACATATTG GATATGCCCT GGATAAAGGC TGCATCATCA GTATTAACCC GGATGCGCAT GAAAAGATTG GTTTGCAGGA CATGCACTTT GGCGTATGTG TTGCACGTAA GGCTGGTTTG TGCAAAGAAC AGACATTTAA TGCCTGGCCG CTGGAGAAAG TAAGCAGCTG GCTTGCATCA AAAGGAAAAT AA
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Protein sequence | MTNQEIADIL LLTASLMELH DENSFKVRSI QNAGFQIEKT EVALFGLSLP ELEKQDGIGK SIAAKIVELS QTGKLTELET LKLNTPEGIV ELLDIKGIGP KKVKTLWKEL NITCKEELLE SCKTNAVAQL KGFGEKTQEN IIQVLQFVMK QSDKHLYGDI EALAFELERK LKADISPQIQ LCGDVRRMME TIDCISFVVP STDFAETVSV LQTLSYLSED PAKSGLYRWR GAERLKNIPV EIYLTTAEKF GSELFKHSSG EKHLRLKSPS GKTFLHLATT TAFATEAALY EHVNLPVIPS ELREGYREMQ LATNNLLSEL ITDADIKGSF HNHSTYSDGK HTLEEMAKEC MALGYAYFGI SDHSKSAFYA NGLDETRIAR QQAEVDALTI SLPGIKIFKG VESDILNDGS LDYADEVLKT FDFIVASIHS NLKMNEEKAT QRLITAIENP YTTMLGHPTG RLLLKREGYP IDHKKIIDAC AANNVIIEIN AHPWRLDMDW RHIGYALDKG CIISINPDAH EKIGLQDMHF GVCVARKAGL CKEQTFNAWP LEKVSSWLAS KGK
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