Gene CHU_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0075 
SymbolthrC 
ID4186394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp89257 
End bp90561 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content38% 
IMG OID638070075 
Productthreonine synthase 
Protein accessionYP_676709 
Protein GI110636502 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT ACAGTACAAA TCATCAGGTA CCAGAAGTAA ATTTAAAAGA AGCAGTATTC 
AAAGGTTTAC CGGATGATAA CGGTTTATAT ATGCCGGAGA ATATTCCAAC ATTGCCGGCT
TCATTTTTTG AAAACATTGA TACCCTTTCT TTTCAGGATA TTGCCTTTGA AGTATGCAAA
GCATTGATCG GTGATGAAGT TCCGGAAAAA GAAATCAGAA GCATTGTTGA TGATGTATTA
ACGTTTGACG CACCTGTTGT TAAGGTTGAA AACAACATCT ATGTGCTTGA ATTGTTTCAT
GGCCCTACGC TGGCATTCAA AGATTTCGGT GCCCGTTTCA TGGCCCGTCT GATGTCTTAC
TTTTTACAAA AAGAAAAGAA AGACATCATG ATTTTAGTAG CAACATCCGG AGATACTGGC
AGCGCCGTTG CACAGGGTTT TCTGGACAAA GCAGGTATTA AAGTTACCAT CTTATATCCA
AGCAAAAAGG TAAGTGATCT GCAGGAAAAG CAGCTTACAA CACTTGGTAA AAACATTACG
GCACTTGAAG TGCTGGGTAC GTTTGACGAT TGTCAGCGTA TGGTAAAACA AGCGTTCTTG
GATAAAGAAA TTACATCTAA GATCAACCTG TCTTCTGCAA ATTCAATCAA CATCAGTCGT
TTGATTCCAC AGTCGTTTTA TTATTTCTAT GCCTACGCAC AAGCGAAAAA GCTAGGAAAG
AAAGTTGTTT TCTCTGTGCC AAGCGGAAAC TTCGGAAATA TATGCGCAGG TTTGATTGCC
AAGAAAATGG GCTTGCCGAT TGATATGTTT GTAGCTTCTA CAAATGCAAA CGACATTATG
CCTAAATACA TTAATACAGG AGTATTTGAA GCAAAACCTT CTGTTGCAAC AATCAGCAAT
GCCATGGATG TTGGAAATCC AAGCAACTAC CCGCGTGTGA TTGAATTATA CGGGAAAGAT
ATCAATGCAT TGCGTAAAGA TGTAGTTGGT AAAGCATATA CAGATGAAGA GACAGCAGCT
GCGGTTAAGT CTGTATATAA GGCTACAGGA TACGTGATGG ATCCGCATGG TGCCGTTGGT
TACTTAGGCT TAAAAGAATA CTTTGAAGAA AGCGGAAAAG ATGCTACAGG TATATTCTTA
GCTACAGCAC ATCCGGCTAA GTTTATTGAA GTCGTAAATG ATATCATTGA AAAAGATGTA
GAGATTCCTG CGCAACTGAA AGAACTGATC AATAAGAAAC AGGAATCTAT TGTTATTGAA
AATGATTTTG AAAAACTGAA ATCGTTTCTG TTGACGGCTC TTTAA
 
Protein sequence
MKLYSTNHQV PEVNLKEAVF KGLPDDNGLY MPENIPTLPA SFFENIDTLS FQDIAFEVCK 
ALIGDEVPEK EIRSIVDDVL TFDAPVVKVE NNIYVLELFH GPTLAFKDFG ARFMARLMSY
FLQKEKKDIM ILVATSGDTG SAVAQGFLDK AGIKVTILYP SKKVSDLQEK QLTTLGKNIT
ALEVLGTFDD CQRMVKQAFL DKEITSKINL SSANSINISR LIPQSFYYFY AYAQAKKLGK
KVVFSVPSGN FGNICAGLIA KKMGLPIDMF VASTNANDIM PKYINTGVFE AKPSVATISN
AMDVGNPSNY PRVIELYGKD INALRKDVVG KAYTDEETAA AVKSVYKATG YVMDPHGAVG
YLGLKEYFEE SGKDATGIFL ATAHPAKFIE VVNDIIEKDV EIPAQLKELI NKKQESIVIE
NDFEKLKSFL LTAL