Gene CHU_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0070 
SymbolgrpE 
ID4186389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp83796 
End bp84335 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content37% 
IMG OID638070070 
Productmolecular chaperone, heat shock protein 
Protein accessionYP_676704 
Protein GI110636497 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.120308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG AAGAAATTAA CGAAGAACAA ATGGATAATT CTGCTGAAAA AGAAGTAGTT 
GCAGAAACTT CTGAAAAGGC GCCTGAATTG ACAGAACTGG AAAAAGCAAC GGCAGAAGCC
GCTGATTGGA AAGATAAATA TGTCAGATTG TACGCAGAAT TTGACAATTA TAAAAGACGG
ACAAGCAAGG AACGCATTGA TTTGCTTAAA ACAGCAAATG AAGATTTAAT GAGCAGTCTG
ATTCCTGTTA TCGATGATTT TGACCGTGCA TTGAAAAATA TTCCTGCTAC AGAAGATACA
AAAGCATTAC GTGAAGGAGT AGAATTGATT CATAATAAAT TCAACAAAAC ACTTACGCAA
AAAGGGTTGA CACCCATGAA TGCGCAGGGT GAAGTATTCA ATAGTGAATT GCATGAAGCA
ATTACACAAA TACCTGCTCC GACAGAAGAT TTGAAAGGCA AAGTAGTGGA TGAAGTTGAG
AAGGGATACT ATTTAGGAGA TAAAGTAATC AGATACGCGA AGGTTGTTAT TGGAGCTTAA
 
Protein sequence
MANEEINEEQ MDNSAEKEVV AETSEKAPEL TELEKATAEA ADWKDKYVRL YAEFDNYKRR 
TSKERIDLLK TANEDLMSSL IPVIDDFDRA LKNIPATEDT KALREGVELI HNKFNKTLTQ
KGLTPMNAQG EVFNSELHEA ITQIPAPTED LKGKVVDEVE KGYYLGDKVI RYAKVVIGA