Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0070 |
Symbol | grpE |
ID | 4186389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 83796 |
End bp | 84335 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070070 |
Product | molecular chaperone, heat shock protein |
Protein accession | YP_676704 |
Protein GI | 110636497 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.120308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACG AAGAAATTAA CGAAGAACAA ATGGATAATT CTGCTGAAAA AGAAGTAGTT GCAGAAACTT CTGAAAAGGC GCCTGAATTG ACAGAACTGG AAAAAGCAAC GGCAGAAGCC GCTGATTGGA AAGATAAATA TGTCAGATTG TACGCAGAAT TTGACAATTA TAAAAGACGG ACAAGCAAGG AACGCATTGA TTTGCTTAAA ACAGCAAATG AAGATTTAAT GAGCAGTCTG ATTCCTGTTA TCGATGATTT TGACCGTGCA TTGAAAAATA TTCCTGCTAC AGAAGATACA AAAGCATTAC GTGAAGGAGT AGAATTGATT CATAATAAAT TCAACAAAAC ACTTACGCAA AAAGGGTTGA CACCCATGAA TGCGCAGGGT GAAGTATTCA ATAGTGAATT GCATGAAGCA ATTACACAAA TACCTGCTCC GACAGAAGAT TTGAAAGGCA AAGTAGTGGA TGAAGTTGAG AAGGGATACT ATTTAGGAGA TAAAGTAATC AGATACGCGA AGGTTGTTAT TGGAGCTTAA
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Protein sequence | MANEEINEEQ MDNSAEKEVV AETSEKAPEL TELEKATAEA ADWKDKYVRL YAEFDNYKRR TSKERIDLLK TANEDLMSSL IPVIDDFDRA LKNIPATEDT KALREGVELI HNKFNKTLTQ KGLTPMNAQG EVFNSELHEA ITQIPAPTED LKGKVVDEVE KGYYLGDKVI RYAKVVIGA
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