| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0026 |
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| Symbol | mltD |
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| ID | 4183675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 28037 |
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| End bp | 29524 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070024 |
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| Product | peptidoglycan-binding lytic transglycosylase |
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| Protein accession | YP_676660 |
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| Protein GI | 110636453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.250795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.876942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTA GAATCACTTC AGCATATACA GGTTTAGCAG TATTATTCTC CATTCTTTTC
ATGGGAGCCA GTCCTGTGTG TGCTCAAACA GATTCTATAA ATAATAAAGT GTTTGCAGAC
ACTACTTCAA TTGTTACATC AGGCGATTCT ACCATTATTG AAGCAGAGAT TATAGATGAA
ACAGTCCCTA AACAGGCTGC ACAATCTTCT GTTGACCAGG TGATCGAGCA ACGTTTAAAA
GTGCTGCAAA ACAAAGTTCC TCTTGTTTAC AATGCAAAAA TAAAAGGGTT CATCGATTAT
TTTTCTGTTC GTAATGCACG TTACGCTATG ATCATGGAGC GCAGAAAACG CATCTATTTC
CCTATGTTTG AAGAGATCTT AAAATCTCAG GGTGTGCCGG AAGAAATAAA GTATCTGGCA
ATTGTTGAAT CCGGATTGAA TGCGAAAGCG GTTTCACCTG CGGGTGCAGC TGGCCTTTGG
CAATTCATGA CCTTTACAGG AAAAGAATTT GGACTGAAAC AGGATGACTT GCTGGACGAA
CGTCTTGATC CGGAAAAAGC TACTGTAGCT GCATGCCGTT ATCTGACAGT TCTGTATAAT
ACATTTAAAG ATTGGGAACT TGCGCTGGCG TCTTACAATT GCGGACCGGG TAATGTGCGA
CGTGCCATTC GTAAATCCGG TTATAAGGAA ACCTTCTGGC AGATCTATGA TTACCTGCCT
AAAGAAACCA GAAGTTATGT GCCGCAGTTT GTTGCGTTAA CATACATTAT GAATCACATG
GGAGACCACG GCATTGTTGC TGATTCAATT GAATACCCGA TTGCTTTTGA TACCATATTT
GTGAATCAAT ATTTTGATAT GTTCACGTTT AGTGATGTAT TGAATATTTG TACAGACGAT
ATGCGTAAAC TGAATCCTGC ACTTAAAAAA GGCGTTTTGT CAGGCGCATA TCCATATAAG
ATCCGTGTGC CGGTAGATAA AATGGCTCAG TTTTATTTAA ACAGAATTGA TATTCTGGAT
GCGTGCAGCA AGGAAGTACC ACGTGAAAAT GTAAGCAGCT CTCCTGTACG TGCCGTCACT
AGCAGCAGCT CATCTTCGTC CGGCGCGCCG GCTTCTACAC AAAAGGTTTA TTATACCGTT
AAGAATGGAG ATGCATTAGG TACGATTGCC AGTAAATATC ATGTTACGGT AACCGATATA
AAACGCTGGA ATAAATTATC ATCAAGCACC ATTCGCGTGG GGCAGCGATT GATTATCTAT
AAAAAAGTTT CGGCAACAGC GTCCAGAATA TCAACTTCAG ATACGGTAAA ATCACCGGCT
GCATCAACGG TACCCAAGTC TGCGCCAAGT GTATATTATG TAAAGAATGG AGATTCGCTT
TGGACCATCT CTCAAAAATT CCCGGGACTC ACCGTTGAGA AAATTAAAAA GCTGAATGGA
TTGACGTCCA ATAGTATTAA AGTTGGGCAG AAACTAATTT TAAATTAA
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| Protein sequence | MKIRITSAYT GLAVLFSILF MGASPVCAQT DSINNKVFAD TTSIVTSGDS TIIEAEIIDE
TVPKQAAQSS VDQVIEQRLK VLQNKVPLVY NAKIKGFIDY FSVRNARYAM IMERRKRIYF
PMFEEILKSQ GVPEEIKYLA IVESGLNAKA VSPAGAAGLW QFMTFTGKEF GLKQDDLLDE
RLDPEKATVA ACRYLTVLYN TFKDWELALA SYNCGPGNVR RAIRKSGYKE TFWQIYDYLP
KETRSYVPQF VALTYIMNHM GDHGIVADSI EYPIAFDTIF VNQYFDMFTF SDVLNICTDD
MRKLNPALKK GVLSGAYPYK IRVPVDKMAQ FYLNRIDILD ACSKEVPREN VSSSPVRAVT
SSSSSSSGAP ASTQKVYYTV KNGDALGTIA SKYHVTVTDI KRWNKLSSST IRVGQRLIIY
KKVSATASRI STSDTVKSPA ASTVPKSAPS VYYVKNGDSL WTISQKFPGL TVEKIKKLNG
LTSNSIKVGQ KLILN
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