Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0020 |
Symbol | rfbA |
ID | 4186901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 21575 |
End bp | 22576 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638070018 |
Product | glucose-1-phosphate thymidyltransferase |
Protein accession | YP_676654 |
Protein GI | 110636447 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.583446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA TTATTCCAAT GGCGGGCATG GGTAAAAGAA TGCGCCCACA CACACTTACA GTTCCTAAAC CTTTAGTGCC GATTGCAGGT AAAGCAATTG TACACAGATT GGTAGAAGAT ATCGCGAAAG TTTGTGGTGA GAAAATTGAA GAGGTTGCTT TCATCATTGG TGATTTTGGT AAAGAAACAG AAAAGCGTTT AATAAAAATT GCTGAATCTG TTGGTGCTAA AGGTTCCATC TATTACCAAC GTGAAGCATT AGGTACGGCG CATGCAATTT ATTGTGCAAA AGAATCGTTA GGAGGTAAAG TAGTAGTAGC ATTTGCAGAT ACATTGTTTA AAGCAGATTT TACACTTGAT ACGTCCAACG AAGGAATCAT TTGGGTGCAG AAAGTAGAAG ATCCAAAACC ATTTGGTGTT GTTAAGTTAA ACGATAAAAA TGAAATCACC GATTTCGTTG AGAAGCCAGA ACATTTTGTT TCTGATTTAG CAATCATTGG CATCTATTAT TTCCAGGATG GTGAAAACCT GAAAAAGGAA TTGCAATATG TAATTGATAA TGATATTAAG GATAAAGGTG AATACCAATT GACTTCTGCA TTAGAAAATA TGAAAAACAA AGGGATTAAA TTTCTTCCTG GTAAAGTAAC AGATTGGCTG GATTGTGGTA ACAAAGATTC TACAGTAGAT ACGAATTCCA GATATTTAGA ATATATCAAA GATCAAAACT TAGTAGCGCC GACAGTTAAG CTTGTTAATT CAGTTATTAT TCAGCCTTCT TATGTAGGTG AAAATGTTGA ATTGACAAAT TCAATCGTTG GTCCGTATGC ATCCATTGGT AATGGAACAA AAATTACAAA TACAGTTATA AACCGCTCAA TCGTACAGGA GAATGCAGTA ATTACCAATG CAACGATTTC AAACTCTATG TTTGGAAATT CAGCTCAATA CAAAGGTAAA GCATTAGACT TAAGTGTAGG CGACTTCAAT GTTATCGCAT AA
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Protein sequence | MKIIIPMAGM GKRMRPHTLT VPKPLVPIAG KAIVHRLVED IAKVCGEKIE EVAFIIGDFG KETEKRLIKI AESVGAKGSI YYQREALGTA HAIYCAKESL GGKVVVAFAD TLFKADFTLD TSNEGIIWVQ KVEDPKPFGV VKLNDKNEIT DFVEKPEHFV SDLAIIGIYY FQDGENLKKE LQYVIDNDIK DKGEYQLTSA LENMKNKGIK FLPGKVTDWL DCGNKDSTVD TNSRYLEYIK DQNLVAPTVK LVNSVIIQPS YVGENVELTN SIVGPYASIG NGTKITNTVI NRSIVQENAV ITNATISNSM FGNSAQYKGK ALDLSVGDFN VIA
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