| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0020 |
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| Symbol | rfbA |
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| ID | 4186901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 21575 |
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| End bp | 22576 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638070018 |
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| Product | glucose-1-phosphate thymidyltransferase |
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| Protein accession | YP_676654 |
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| Protein GI | 110636447 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.583446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTA TTATTCCAAT GGCGGGCATG GGTAAAAGAA TGCGCCCACA CACACTTACA
GTTCCTAAAC CTTTAGTGCC GATTGCAGGT AAAGCAATTG TACACAGATT GGTAGAAGAT
ATCGCGAAAG TTTGTGGTGA GAAAATTGAA GAGGTTGCTT TCATCATTGG TGATTTTGGT
AAAGAAACAG AAAAGCGTTT AATAAAAATT GCTGAATCTG TTGGTGCTAA AGGTTCCATC
TATTACCAAC GTGAAGCATT AGGTACGGCG CATGCAATTT ATTGTGCAAA AGAATCGTTA
GGAGGTAAAG TAGTAGTAGC ATTTGCAGAT ACATTGTTTA AAGCAGATTT TACACTTGAT
ACGTCCAACG AAGGAATCAT TTGGGTGCAG AAAGTAGAAG ATCCAAAACC ATTTGGTGTT
GTTAAGTTAA ACGATAAAAA TGAAATCACC GATTTCGTTG AGAAGCCAGA ACATTTTGTT
TCTGATTTAG CAATCATTGG CATCTATTAT TTCCAGGATG GTGAAAACCT GAAAAAGGAA
TTGCAATATG TAATTGATAA TGATATTAAG GATAAAGGTG AATACCAATT GACTTCTGCA
TTAGAAAATA TGAAAAACAA AGGGATTAAA TTTCTTCCTG GTAAAGTAAC AGATTGGCTG
GATTGTGGTA ACAAAGATTC TACAGTAGAT ACGAATTCCA GATATTTAGA ATATATCAAA
GATCAAAACT TAGTAGCGCC GACAGTTAAG CTTGTTAATT CAGTTATTAT TCAGCCTTCT
TATGTAGGTG AAAATGTTGA ATTGACAAAT TCAATCGTTG GTCCGTATGC ATCCATTGGT
AATGGAACAA AAATTACAAA TACAGTTATA AACCGCTCAA TCGTACAGGA GAATGCAGTA
ATTACCAATG CAACGATTTC AAACTCTATG TTTGGAAATT CAGCTCAATA CAAAGGTAAA
GCATTAGACT TAAGTGTAGG CGACTTCAAT GTTATCGCAT AA
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| Protein sequence | MKIIIPMAGM GKRMRPHTLT VPKPLVPIAG KAIVHRLVED IAKVCGEKIE EVAFIIGDFG
KETEKRLIKI AESVGAKGSI YYQREALGTA HAIYCAKESL GGKVVVAFAD TLFKADFTLD
TSNEGIIWVQ KVEDPKPFGV VKLNDKNEIT DFVEKPEHFV SDLAIIGIYY FQDGENLKKE
LQYVIDNDIK DKGEYQLTSA LENMKNKGIK FLPGKVTDWL DCGNKDSTVD TNSRYLEYIK
DQNLVAPTVK LVNSVIIQPS YVGENVELTN SIVGPYASIG NGTKITNTVI NRSIVQENAV
ITNATISNSM FGNSAQYKGK ALDLSVGDFN VIA
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