Gene CHU_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0004 
Symbol 
ID4186885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3357 
End bp4127 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content40% 
IMG OID638070002 
Productphosphosulfolactate synthase 
Protein accessionYP_676638 
Protein GI110636431 
COG category[S] Function unknown 
COG ID[COG1809] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAA ATTTTACCCT TTCTAAGGTT CCTGAGAGAA CAACTAAGCC ACGCGAGTCT 
GGTTTTACAA TGGTGATGGA TAAAGGCTTA AGTTGCCGGG AAGTAGAAGA CATGCTTTCT
GTCTCCAGTA ACTATATTGA TATCGTAAAA CTTGGTTGGG CAACCTCATT TGTAACACCG
ACATTAAAAG AAAAATTAGC ATTATATAAA TCAGCAGGTA TTCCATGCTA TTTAGGAGGC
ACCTTATTTG AAGCATTTAT TGTAAGAGAT CAGTTTGATG ATTACAGAAA ATTGCTTGAT
AAATATGATT TAGGTTATGC AGAAGTATCT GACGGATCTA TTGAATTGGG ACACGCTGAA
AAATGCGAAT ACATTGCCAA GCTTGCCAAG CAGGTGACTG TATTATCAGA AGTGGGCTCT
AAGGATGCAG AAAAAATTAT TCCGCCATCT AAGTGGATCA AACTGATGAA TACAGAGCTG
GAAGCTGGTG CATGGAAAGT AATCGGTGAA GCTCGTGAAG CGGGCAACGT AGGTCTTTTC
CGTTCCACAG GTGAAGTTCG TTCGGGTTTG GTGGAGGATA TTTTAAGTGC AGTGCCGGTT
GAAAAGATTA TCTGGGAAGC GCCTCAGAAA GAACAGCAGG TGTTTTTTGT AAAACTGTGC
GGTGCAAATG TAAACTTAGG AAACATTGCT CCCAATGAAT TGATCCCGCT TGAAACGGTT
CGTTTAGGAT TGAGAAGCGA TACGTTTCAT CACTTTATTG ATAAGCTATA A
 
Protein sequence
MYQNFTLSKV PERTTKPRES GFTMVMDKGL SCREVEDMLS VSSNYIDIVK LGWATSFVTP 
TLKEKLALYK SAGIPCYLGG TLFEAFIVRD QFDDYRKLLD KYDLGYAEVS DGSIELGHAE
KCEYIAKLAK QVTVLSEVGS KDAEKIIPPS KWIKLMNTEL EAGAWKVIGE AREAGNVGLF
RSTGEVRSGL VEDILSAVPV EKIIWEAPQK EQQVFFVKLC GANVNLGNIA PNELIPLETV
RLGLRSDTFH HFIDKL