Gene CHAB381_1707 details

Gene Information

• Locus tag: CHAB381_1707
• Symbol: uvrB
• ID: 5408938
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1622462
• End bp: 1624435
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640871375
• Product: excinuclease ABC subunit B
• Protein accession: YP_001407219
• Protein GI: 154148242
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0111869
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAATT TTGAAATTGT CAGTAAATTC TCGCCAAGCA AAGATCAACA AAATGCGATT 
GAAAATATAA CCGCATCAAT AAAAAACGGA AATAAATATC AAACTTTATT AGGTGTTACC 
GGTTCAGGCA AAACTTTTAC AATGGCAAAT ATTATAAAAA ATTTACAAAT GCCTGCTTTG 
ATAATGACAC ACAATAAATC CCTTGCAGCA CAGCTTTACA GCGAATTTAA AGGCTTTTTT 
CCAAAAAATC ACATTGAATA TTTTATAAGT TATTATGACT ATTATCAGCC CGAAGCCTAC 
ATTCCGCGTC AGGATCTTTT TATAGAAAAA GACAGTTCTA TAAATGATGA ATTGGAGCGT 
CTTAGACTTT CTGCTACGGC AAGTTTGCTT AGTTTTGACG ATGTTGTAAC AATAGCTTCC 
GTTTCAGCGA ATTACGGATT AGGAAATCCT GCAGAATATC AAGGAATGGT ACTGTTTTTA 
GAGATAAATA AGAAATTCAG TCTTAAATTT CTGCTTAGAA AACTTGTGGA TATGGGATAC 
AGCAGAAACG ACACATATTT TGATCGCGGA GATTTTCGCG TAAACGGCGA TATAATAGAT 
ATTTATCCTG CATATTTTAA CGATGAAGCG ATTAGACTTG AATTTTTCGG CGATGAACTT 
GATGATATGT ATCATTTCGA TGTGATTGAA AACAAAAAAA CTCAAAATTT AAAAAAATTT 
ATCTTATATC CGACTTCACA ATTTATAGTA GGCGAAAATC GTTTGAAAGA GGCGATAAAA 
GGGATAGAAA ACGAACTTGG CGAAAGACTT GAATTTTTTA ATGATAATGG CAAATTGGTT 
GAAGCGCAAA GATTAAAGCA AAGAGTGGAT TTTGATCTTG AAATGCTGGA ATCTACAGGA 
ATGTGCAAAG GAATCGAAAA TTATGCAAGA TATTTAACAG GTCAAAATGC AGGCGAAACA 
CCATATTCAC TCTTCGATTA TTATGAAATC AAAGGAATGG ATTATTTGGT TATCATTGAT 
GAAAGCCATG TGAGTTTGCC GCAATTTCGC GGTATGTATG CAGGTGATAG AAGCCGCAAA 
GAAACACTTG TTGAGTATGG TTTCAGACTT CCTTCCGCGC TTGATAACCG CCCTTTGATG 
TTTGATGAGT TTATAAATAA ACGCGCCAAA TTTCTTTTTG TTTCGGCTAC ACCGAACGAT 
TACGAGCTTG AACTCAGCAA AGACCATGTT TATTACCAAA TTTTACGTCC TACAGGACTT 
CTTGACCCTG AGATTGTTTT AAAAGACAGT GATAATCAAG TGGAAATTTT ATATGATATG 
GCAAAAGAGG TTATCGCCGA TAATGAAAGA GTTTTAGTAA CCGTGCTGAC AAAAAAAATG 
GCTGAAGAGC TTAGTAAATA TTATCTGGAA CTTGGCCTTA AAGTAAAATA TATGCATTCC 
GATATCGACG CAATTGAGCG AAACGAGTTG ATTCGAGGAC TTAGAACCGG AGATTTTGAT 
ATGCTGATCG GCATAAATTT ACTTCGCGAA GGTCTTGATC TGCCTGAAGT CAGTTTGATT 
GCGATAATGG ACGCCGATAA AGAGGGTTTT TTAAGATCGC GCACGAGTCT TATCCAAACA 
ATGGGGCGGG CTGCAAGAAA TGTAAATGGA AAAGTGGTAA TGTTTTGCAA AAAAATCACA 
AATTCCATGA AAGAAGCCAT TGAAATAACT CAAAAAAGAA GAAAATATCA AGACGAATAC 
AACAAAACAC ACAATATAAC ACCGAAATCC GTCAGCAGAA ATGTGGAGGA AAGCTTAAAA 
CTTGACGACA CTGAAGCAAT CGATAGAGCT ATGAAAGCGG AAAAAATGCC TTCAAGCGAA 
CGGGCGAAAA TCGTTAAAGA TTTGCGAAAA CAGATGATGG AAGCCGCCGA TAAATTGGAA 
TTTGAAAAAG CGGCGGCTTT ACGCGACGAG ATTAAAAAGA TGAGAAAATT GTAA 

 

Protein sequence

MKNFEIVSKF SPSKDQQNAI ENITASIKNG NKYQTLLGVT GSGKTFTMAN IIKNLQMPAL 
IMTHNKSLAA QLYSEFKGFF PKNHIEYFIS YYDYYQPEAY IPRQDLFIEK DSSINDELER 
LRLSATASLL SFDDVVTIAS VSANYGLGNP AEYQGMVLFL EINKKFSLKF LLRKLVDMGY 
SRNDTYFDRG DFRVNGDIID IYPAYFNDEA IRLEFFGDEL DDMYHFDVIE NKKTQNLKKF 
ILYPTSQFIV GENRLKEAIK GIENELGERL EFFNDNGKLV EAQRLKQRVD FDLEMLESTG 
MCKGIENYAR YLTGQNAGET PYSLFDYYEI KGMDYLVIID ESHVSLPQFR GMYAGDRSRK 
ETLVEYGFRL PSALDNRPLM FDEFINKRAK FLFVSATPND YELELSKDHV YYQILRPTGL 
LDPEIVLKDS DNQVEILYDM AKEVIADNER VLVTVLTKKM AEELSKYYLE LGLKVKYMHS 
DIDAIERNEL IRGLRTGDFD MLIGINLLRE GLDLPEVSLI AIMDADKEGF LRSRTSLIQT 
MGRAARNVNG KVVMFCKKIT NSMKEAIEIT QKRRKYQDEY NKTHNITPKS VSRNVEESLK 
LDDTEAIDRA MKAEKMPSSE RAKIVKDLRK QMMEAADKLE FEKAAALRDE IKKMRKL