| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1684 |
|---|
| Symbol | |
|---|
| ID | 5409429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 1602120 |
|---|
| End bp | 1603481 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640871352 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001407196 |
|---|
| Protein GI | 154148778 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.653091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAG GAAAATTTAA AATTTTATTT TATTTCGTGA TTTTAGTTTG TTTGGTTTTT
GGTATTTATA TGTTTTTAAA TTCTAAACTT TTTGAACGAA ATGCTCCTAA AATAGAGATT
GAAGACATAA TTTATTCAAA TTTGAAAACA CCTCTTCCTG TTTATATAAA AGATGACAGC
GGCATAAAAT TTGTAGAAAT TTCACTTTAT GACGGCAATA ACAAAACAAC AATTTATAAT
GAAAATTTTA CTGTAATAGC ACCGGAGCAA CGATTTGAAC TTACATTTCC AAAAGGTATG
ATGGTAAATA AAAATGCGAA TTATGAGATT GAAATCAAAG CAACGGACAA CAGCAAGTGG
AATTTTACTA TGGGAAATAC AAGCATAAAA CGCGCAAAAA TAATAATAGA CAATAAAAAA
CCGTTTGTCG AGGTTATAGG AAAATCATAC AAAATTTCAA AAGGAGGCTC GGCTGTCGTT
GTTTTTAAAG CAAATGACGA AATGCTTAAA GATGTCTATA TCAAAACAAA TTACGGCAAA
AATTTTATAC CCGTAAAATT TATAAAAGAC GGCTTTTACG CTTCGTTGGT CGCATGGCCT
GCAAATCAGA ATGAATTTAG CGCCGATATA GTAGCGGTTG ATGTTGCAGG CAACGAAAGC
GTAAGCAGAA TCAGATATTT TTACCAAGAT AGAAATTATA AAATTTCAAA TATAAAATTG
AATGAAAATT TTATAAATGG TAAAGTCAGC GATCTTGCCG ATACTTACGC TCAAAATTCG
GATGAGCTTA AAGGCGTTGA TAAATTTAAG TTTGTAAATG AAACGCTTCG CGGTAAAAAT
GAGGAACTTA TTTATAGTTT CAGCTCAAAA GTACCGGAAA CGGAGCTTTC AAATTTTAAA
ATTTCGCCTT TTTATCCTCT AAAAAACGCT GCTGCGGTTG CAAGTTTCGG AGATCATAGA
ATTTATTCAT GGGAAGATAA TCAAATCAGT GAATCGTGGC ATTTAGGACT TGATCTTGCA
AGTGTTGCAA ATGCTGAAAT TATAAACTCG AATGACGGAG TTGTAGTATT TTCCGGAGAA
AACGGAATTT ACGGATTAAA TATCGGTGTT TATTACGGTT TTGGACTTTA TGCGATTTAT
GGGCATTGTT CCGCTTCAAA TTTTACAGAA GGCACTCAGA TAAAAGCGGG CGAAATTTTA
GGTAAAACAG GAAGCTCAGG TTTTGCATTT GGAGATCATC TGCATTTTGG AGTTTTGGTT
CAAGGTGTTG AAGTTAGACC TGAGGAGTGG ATGGATGAAA AATGGATGAA AGAAAATATA
TATGACATTT TAGAAAATTC CAAAGAAATG ATACGAAATT AA
|
|---|
| Protein sequence | MRRGKFKILF YFVILVCLVF GIYMFLNSKL FERNAPKIEI EDIIYSNLKT PLPVYIKDDS
GIKFVEISLY DGNNKTTIYN ENFTVIAPEQ RFELTFPKGM MVNKNANYEI EIKATDNSKW
NFTMGNTSIK RAKIIIDNKK PFVEVIGKSY KISKGGSAVV VFKANDEMLK DVYIKTNYGK
NFIPVKFIKD GFYASLVAWP ANQNEFSADI VAVDVAGNES VSRIRYFYQD RNYKISNIKL
NENFINGKVS DLADTYAQNS DELKGVDKFK FVNETLRGKN EELIYSFSSK VPETELSNFK
ISPFYPLKNA AAVASFGDHR IYSWEDNQIS ESWHLGLDLA SVANAEIINS NDGVVVFSGE
NGIYGLNIGV YYGFGLYAIY GHCSASNFTE GTQIKAGEIL GKTGSSGFAF GDHLHFGVLV
QGVEVRPEEW MDEKWMKENI YDILENSKEM IRN
|
|---|
| |