Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1615 |
Symbol | glcD |
ID | 5409457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 1537749 |
End bp | 1539131 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640871285 |
Product | glycolate oxidase, subunit GlcD |
Protein accession | YP_001407138 |
Protein GI | 154148549 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTA AACATATAAA TTTTTTAAAA AACTCGGTTG GCGCGGATAA TGTTTACGAT GATGACGCGC ATTTAACGGC ATACTGCTAC GACGCGACAA AAAATCGCTT CAAACCGGAC GCCGTCATAT TTCCACGAAA TGAAGAAGAT GTAAGCAAAA TTTTAAAATA CTGCAATGAA AATAAAATTG CAGTTGTGCC AAGAGGCGCA GGTAGCGGCT TTACAGGCGG AAGTTTGCCG GCAAACGGCG GTATAATTCT AGCCTTTGAA AAACATATGA ATAAAATTTT AGAAATCGAT ATGCAAAATT TAGTCGCTGT CGTACAACCT GGCGTTATAA ATAAAGATTT GCAAAAAGCG GCCGAAGCAA AAGGACTTTT CTACCCGCCT GATCCTGCAA GTCAAGATTA TTGCACGATC GGTGGTAATG TAAGCGAAAA TGCGGGCGGA ATGAGAGCCG CAAAATACGG CATAACAAAA GATTATGTAA TGGCGCTTCG CGCCGTTTTG CCAAATGGAG AGATAATAAG AGCCGGAAAG CGCACGATAA AAGATGTCGC AGGATACAAT ACCGCAGGAA TTTTAATCGC CAGTGAAGGC ACTTTGGCAG TTATTACTGA AATCACCTTA AAACTTATAG CAAAACCGAA AATGAGTGAA ACCGCAATGG GAATTTTTGA TTCCGTAGAT GAAGCGATGA ATGCCGTTTA TAAAACAATG GCGGGTGGCG TAGTGCCTGT AGCAATGGAA TTTTTGGATA ATCTTAGCAT TCGCGCCGTT GAAGAAAAAT TTCACAAAGG TTTATCCGTT GATGCTGGAG CGATTTTGAT AACCGAAGTA GATGGAAACT CAAAAGATGA TTTATCACGC CAACTTGATT TAATAGAAGC GGCTTTTAAA GAAAACGGAT GCACAAATTT TAAGCGCGCC AAAGATAAAC AGGAAAGTGA TGACATCTGG TTCGCAAGAA GAAATGTAAG TCAGGCAATC ACAATTTACG GAAATAAAAA ACTGAACGAA GACATCACCG TTCCGCGCTC AAAGCTACCG GAACTTTTGA AAAAAATAGG CGAAGTGGCG CAAGAGCACG CGTTAAAAGT ACCTTGTTTC GGACATACCG GCGATGGAAA TGTGCATACA AACGTTATGG TGGAAGACGG AAACGATAAA GCGCAACTTG AAAACGGGCA AAAGGCAATC GAAAAAATAT TTAAAATCGC CGTTGATTTA GGTGGAACTT TGAGTGGAGA ACACGGCATA GGATTAAGCA AAGCGCCTTT TATGCACTTG GCTTTTAGTG AAGCCGAGAT GAATTTATTT CGCACCGTCA AAAAAGCTTT TGATCCTAAT AATATTTTAA ATCCCGGAAA AATGGGACTT TAA
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Protein sequence | MNAKHINFLK NSVGADNVYD DDAHLTAYCY DATKNRFKPD AVIFPRNEED VSKILKYCNE NKIAVVPRGA GSGFTGGSLP ANGGIILAFE KHMNKILEID MQNLVAVVQP GVINKDLQKA AEAKGLFYPP DPASQDYCTI GGNVSENAGG MRAAKYGITK DYVMALRAVL PNGEIIRAGK RTIKDVAGYN TAGILIASEG TLAVITEITL KLIAKPKMSE TAMGIFDSVD EAMNAVYKTM AGGVVPVAME FLDNLSIRAV EEKFHKGLSV DAGAILITEV DGNSKDDLSR QLDLIEAAFK ENGCTNFKRA KDKQESDDIW FARRNVSQAI TIYGNKKLNE DITVPRSKLP ELLKKIGEVA QEHALKVPCF GHTGDGNVHT NVMVEDGNDK AQLENGQKAI EKIFKIAVDL GGTLSGEHGI GLSKAPFMHL AFSEAEMNLF RTVKKAFDPN NILNPGKMGL
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