| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1445 |
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| Symbol | |
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| ID | 5408120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 1389787 |
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| End bp | 1391091 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640871117 |
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| Product | putative membrane-fusion protein |
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| Protein accession | YP_001406984 |
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| Protein GI | 154148902 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00910386 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAC TTTTTAAAAA AATTGACGAT TCATACGAAT TTAAACCAAG TATAATTGAA
ATAGAGGATA GACCGCAAAA TCCGCTGGGA AAAACGATTC TATGGATAGT TGTAACAATT
TTCGTTTTTT TGGTTTTATG GCTTGTGTTT GCCAAAATAG ATATAGTAGT AAGCGGCAAC
GGAAAAGTAA TACCAAGCGG AAATATTAAA ATTTTAAAAC CGCTTGAAAA CGGAATAATA
TCAAAAATTT TAGTTTATGA AGGACAAAAA GTATCTAAAA ATGAACCGCT CATAATCATT
GATCCAAGCG TATCTAAAGT AAATTTAATC ACGCAGGAAG AAAAACTAAA AGCACTTAAT
TTCAGTATAA AAAGACTTGA ACTTTTAAGC TTCAGTGAAA AATTGCAAAA AGATGCAAAT
TTAAGCAGCG ACGAAATGAA TCTTTATATC AATCAAAAAC AAAATTTTGA TGAAAGCATA
GATGAACTGA ATTTTAAAAT TTCAGGCATA CTAAACTCAA TAAACGGCAC ACAAGCTGAA
ATTTCAAAAT TAAGCGAACT GAAAATTTTA GCGGATAAAA GGGTTAAAAA TTTAAAAAAC
GTTCGAGATA TAATAGCAAG CAAAGATTAT GAGGATGCGC TTTCAAAACA GATTGATTTA
AACTCGCAAA TAAAAAGCAC AAATGAAAAT TTACTTGCAC TAAAATCAAA ACTGAGTGAA
ACTAAAAAAA CGCTTGAGAA TTTTAAAACG AGTCAAAAAG CTAAATTTTT GGATGAACTT
TTAACAAAAC AAAAAGAAGC CGCCGAAATC AAAGCTTCTA TAAATGCACT AAATTTCCAA
ACGAAACAAC AAATCGTAGC ATCTCCTGTA GACGGTTATG TAGGAAAACT TTTGATTCAT
ACGGTTGGAA GTTCCGTTAG CAGTGGTGAG GAGCTAATCA GTATAATTCC CGCAAACGAG
CCTCTAATCA TAAGTGCTAA AATTTTAAAT AAAGATATAG GATTTTTACA AAATGGACAA
AAAGTAGCCA TTAAAGTTGA TACTTTCAAC TTTCAGAAAT ACGGCAAAAT AGACGGAGAG
CTTATACATA TAGGAAACGA CGCTATAAAA GACGAAAAAC TTGGGGAAAT TTTTGAAATA
AAGGTAAAAC CGAAAAAATT AAGTCTGATG GTAGAAGGCA AAGAAAAACA AATAGAGCCC
GGAATGAGCG TAATAGCTGA AGTGAAAGTC GGAAAAAGAC GAGTCATAGA GCTTTTCATA
TATCCTATCG TAAAATATCT CGATGAAGGA CTTAGTGTAA GATAA
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| Protein sequence | MFKLFKKIDD SYEFKPSIIE IEDRPQNPLG KTILWIVVTI FVFLVLWLVF AKIDIVVSGN
GKVIPSGNIK ILKPLENGII SKILVYEGQK VSKNEPLIII DPSVSKVNLI TQEEKLKALN
FSIKRLELLS FSEKLQKDAN LSSDEMNLYI NQKQNFDESI DELNFKISGI LNSINGTQAE
ISKLSELKIL ADKRVKNLKN VRDIIASKDY EDALSKQIDL NSQIKSTNEN LLALKSKLSE
TKKTLENFKT SQKAKFLDEL LTKQKEAAEI KASINALNFQ TKQQIVASPV DGYVGKLLIH
TVGSSVSSGE ELISIIPANE PLIISAKILN KDIGFLQNGQ KVAIKVDTFN FQKYGKIDGE
LIHIGNDAIK DEKLGEIFEI KVKPKKLSLM VEGKEKQIEP GMSVIAEVKV GKRRVIELFI
YPIVKYLDEG LSVR
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