Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1401 |
Symbol | |
ID | 5409604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1340402 |
End bp | 1344619 |
Gene Length | 4218 bp |
Protein Length | 1405 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640871078 |
Product | putative large adhesin |
Protein accession | YP_001406950 |
Protein GI | 154148720 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.018922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAG CTTATAGACA TGTCTATAAA GATGGTATAG GCTGGGTGGC TATCGCTGAA AATGCTTCAT GTGTGAGCTC GAGTAAGGGA AGTGGCACAG TATCCAGTAA AACTAAAGTT GAGGTTTTAA AAAACTTTTT TGATTTAAGA AATTCAGTTG TTTTAAATAA TGGCTTTTTA CTAAAAGGAC TATTTGCAGC AACTCTATTT TGTGGAGTGT TTGTAGGTGA TTTGAAAGCA TATAATGCTG AACCGGAAGA AATAGCAAAA ATTCAAAATA ACGGCACGGT TGTTTATACG GACGATCAGA ATTTTAGAGT GGTGGAGTCT ATAGAAAATG GCGAAAAAAT TTTTAAAAGA GTCGATGAAA ATGGCAACAT TGTCGGAGAA GGTGGTAAAA AACTTTTAGA ATTTGAAGGC AAATACTATG ACTATGAAAA AATTCTATCG ATGAAACAAA GTGACGGCTC ATATTTAATC AATGATAAAT ACTATGTTAT TCCAGATGGA ACTTTAAGCG GGAAAGGAAT GGCCGAACGA CCTGTTTTTG TAGAAAGAGA CTATGTATAT ACTGCTGGTG GCAAGGCAAG CGGCAAAAAA ATGGCCAGGC TAGATACTGG TGACGGTAAA TGGTATGTCT ATAATTTGGC TGATAACGAA AAGCTATATT ATGCAAGATT TGAAACTGAT AATAAATACA AGGAAAATAA TTGTAAAACA AACAAAAACA CTTCTTTTAA GGACGGGTAT TGTTACGGTT TTTGGCAAAT TGGTGAGCTA GAAACTGAAA AAGTGGCCGG AATGGATGTT CCTGTTATAG ATGCCGATGG ATATTATGTA AAAAGAATAA AATCTGCAAC AGAGCTTACA ACTGCCAATG AGATTAGAGT TTATGGCAAA ACCTTATCAA CCTTAAATTT ACCTACTGGT GGCGCAACAA CCCCAGAGCG TCTTAGTTTA GTCGGAAAAG ACGGTAAAAC TGTAAAACCT ATAAAATACG ATGCAAATGA CCAACAAGTA AAAGACGGTA AAAAGACCAT CAGAGATAAC AAAGACGGAA CTATTCGCCT TGGCAATGTC GCTAGAGCAA TACAAGACGA TGAAGCTGTA AATTTAGGAC AACTAAACGA AAAATTACAA AATGTAAAAG TCCCTTATGT AAGTATAAAA TCAACTCAAA CAGGCGCCGG CTCAAACTAT AACTCTGACG GCGCCACAGG TGATGACTCT ATCGCTATCG GACCAAATGC AGGAGCCAGC GCTGAAAACT CAGTAGCCAT CGGACCAAAT GCCAAGGCTA GCGAGTATGG CTCAGTAGCT ATTGGAGCTG ATGCGCAAGC AATCAATAAA AATTCAGTAT CATTAGGAGC TGGAGCTAAA ACTACAGATG AAGATTCAGT CGCTATCGGT CTTAATGCAC AAGCACAAGG AGATAGTTCG TATGCTTTGG GAGCTTGGTC AATAGCAGCA GAAGAAGGAG CAACTACGAT TGGAACTTAT TCACGTGCAA ATAAAAAAGA TTCTTTTGCG CTAGGTGTCG GAGCTAAAGC AAATATAGAA AGCTCTGTAG CTTTGGGTTC AGACTCTGTA GCCGATACTG AGAAAGGAGT TGCAGGTTTT GACTTTGTAA CCGACAAGCA AAGCACAGAG ACAAGCCCTA CTTGGAAAAG CACAGCAGGA GCAGTATCTG TAGGAGATAA AGCCAGTAAT ACTACTCGCC AAATCACAAA TGTCGCAGCA GGATATGCTG ACACCGACAC AGTCAATGTC GCTCAACTAA AAGCTGGTTT AAATAACAAA GCCGATTTAA ATGCAGGAAA TTTAAGCAAT AAAACAGGCA ATACAGCTAA TGAAACATAT GCTGATGTAT GGAAAACAGC TCTTGGCATA AGTGACGCTA ATATTCAAAA GCTAGCTCAA AAATCTGTTG TAGTAGCAAA TGGAGAAAAC ACAACAGTTG CTAAAGATAC TTCAGCAACA GGAGACATAA CTTATAAAGT TAATGTTAAA TTAGATGAAT ATGCTAAATC AACTGACATA GATACAAAAC TTGGTGATTA TGTAAAATCA GTAACAGGTG ATGACTTTAT CAAAGTAGAC GCAACCAAAA AACAAAGCCC AGCTTTATCT CTTGATACAG ATAAGCTTGC AAACGATAGC ACATTTGTAA CAAACATTGC AGGAAATAAG GTATTTAAAA ATACATATGT AACAAATGAA AATTTGGAAA AAGGCTATAC AAAACTTGAT GGAACAAATC TATTTAAAGA TAATACTTTA AATGAATTAA ATCCAAATTT CAAAAAAGAC AATTGGAGAA AAGCTCTTGA TATAAGTGAC GCTAATATTC AAAAGCTAGC TCAAAAATCT GTTGTAGTAG CAAATGGAGA AAACACAACA GTTGCTAAAG ATACTTCAGC AACAGGAGAC ATAACTTATA AAGTTAATGT TAAATTAGAT GAATATGCTA AATCAACTGA CATAGATACA AAACTTGGTG ATTATGTAAA ATCAGTAACA GGTGATGACT TTATCAAAGT AGACGCAACC AAAAAACAAA GCCCAGCTTT ATCTCTTGAT ACAGATAAGC TTGCAAACGA TAGCACATTT GTAACAAACA TTGCAGGAAA TAAGGTATTT AAAAATACAT ATGTAACAAA TGAAAATTTG GAAAAAGGCT ATACAAAACT TGATGGAACA AATCTATTTA AAGATAATAC TTTAAATGAA TTAAATCCAA ATTTCAAAAA AGACAATTGG AGAAAAGCTC TTGATATAAG TGACGCTAAT ATTCAAAAGC TAGCTCAAAA ATCTGTTGTA GTAGCAAATG GAGAAAACAC AACAGTTGCT AAAGATACTT CAGCAACAGG AGACATAACT TATAAAGTTA ATGTTAAATT AGATGAATAT GCTAAATCAA CTGACATAGA TACAAAACTT GGTGATTATG TAAAATCAGT AACAGGTGAT GACTTTATCA AAGTAGACGC AACCAAAAAA CAAAGCCCAG CTTTATCTCT TGATACAGAT AAGCTTGCAA ACGATAGCAC ATTTGTAACA AACATTGCAG GAAATAAGGT ATTTAAAAAT ACATATGTAA CAAATGAAAA TTTGGAAAAA GGCTATACAA AACTTGATGG AACAAATCTA TTTAAAGATA ATACTTTAAA TGAATTAAAT CCAAATTTCA AAAAAGACAA TTGGAGAAAA GCTCTTGATA TAAGTGACGC TAATATTCAA AAGCTAGCTC AAAAATCTGT TGTAGTAGCA AATGGAGAAA ACACAACAGT TGCTAAAGAT ACTTCAGCAA CAGGAGACAT AACTTATAAA GTTAATGTTA AATTAGATGA ATATGCTAAA TCAACTGACA TAGATACAAA ACTTGGTGAT TATGTAAAAT CAGTAACAGG TGATGACTTT ATCAAAGTAG ACGCAACCAA AAAACAAAGC CCAGCTTTAT CTCTTGATAC AGATAAGCTT GCAAACGATA GCACATTTGT AACAAACATT GCAGGAAATA AGGTATTTAA AAATACATAT GTAACAAATG AAAATTTGGA AAAAGGCTAT ACAAAACTTG ATGGAACAAA TCTATTTAAA GATAATACTT TAAATGAATT AAATCCAAAT TTCAAAAAAG ACAATTGGAG AAAAGCTCTT GATATAAGTG ACGCTAATAT TCAAAAGCTA GCTCAAAAAT CTGTTGTAGT AGCAAATGGA GAAAACACAA CAGTTGCTAA AGATACTTCA GCAACAGGAG ACATAACTTA TAAAGTTAAT GTTAAATTAG ATGAATATGC TAAATCAACT GACATAGATA CAAAACTTGG TGATTATGTA AAATCAGTAA CAGGTGATGA CTTTATCAAA GTAGACGCAA CCAAAAAACA AAGCCCAGCT TTATCTCTTG ATACAGATAA GCTTGCAAAC GATAGCACAT TTGTAACAAA CATTGCAGGA AATAAGGTAT TTAAAAATAC ATATGTAACA AATGAAAATT TGGAAAAAGG CTATACAAAA CTTGATGGAA CAAATCTATT TAAAGATAAT ACTTTAAATG AATTAAATCC AAATTTCAAA AAAGACAATT GGAGAAAAGC TCTTGATATA AGTGACGCTA ATATTCAAAA GCTAGCTCAA AAATCTGTTG TAGTAGCAAA TGGAGAAAAC ACAACAGTTG CTAAAGATAC TTCAGCAACT AGGAGACATA ACTTATAA
|
Protein sequence | MNKAYRHVYK DGIGWVAIAE NASCVSSSKG SGTVSSKTKV EVLKNFFDLR NSVVLNNGFL LKGLFAATLF CGVFVGDLKA YNAEPEEIAK IQNNGTVVYT DDQNFRVVES IENGEKIFKR VDENGNIVGE GGKKLLEFEG KYYDYEKILS MKQSDGSYLI NDKYYVIPDG TLSGKGMAER PVFVERDYVY TAGGKASGKK MARLDTGDGK WYVYNLADNE KLYYARFETD NKYKENNCKT NKNTSFKDGY CYGFWQIGEL ETEKVAGMDV PVIDADGYYV KRIKSATELT TANEIRVYGK TLSTLNLPTG GATTPERLSL VGKDGKTVKP IKYDANDQQV KDGKKTIRDN KDGTIRLGNV ARAIQDDEAV NLGQLNEKLQ NVKVPYVSIK STQTGAGSNY NSDGATGDDS IAIGPNAGAS AENSVAIGPN AKASEYGSVA IGADAQAINK NSVSLGAGAK TTDEDSVAIG LNAQAQGDSS YALGAWSIAA EEGATTIGTY SRANKKDSFA LGVGAKANIE SSVALGSDSV ADTEKGVAGF DFVTDKQSTE TSPTWKSTAG AVSVGDKASN TTRQITNVAA GYADTDTVNV AQLKAGLNNK ADLNAGNLSN KTGNTANETY ADVWKTALGI SDANIQKLAQ KSVVVANGEN TTVAKDTSAT GDITYKVNVK LDEYAKSTDI DTKLGDYVKS VTGDDFIKVD ATKKQSPALS LDTDKLANDS TFVTNIAGNK VFKNTYVTNE NLEKGYTKLD GTNLFKDNTL NELNPNFKKD NWRKALDISD ANIQKLAQKS VVVANGENTT VAKDTSATGD ITYKVNVKLD EYAKSTDIDT KLGDYVKSVT GDDFIKVDAT KKQSPALSLD TDKLANDSTF VTNIAGNKVF KNTYVTNENL EKGYTKLDGT NLFKDNTLNE LNPNFKKDNW RKALDISDAN IQKLAQKSVV VANGENTTVA KDTSATGDIT YKVNVKLDEY AKSTDIDTKL GDYVKSVTGD DFIKVDATKK QSPALSLDTD KLANDSTFVT NIAGNKVFKN TYVTNENLEK GYTKLDGTNL FKDNTLNELN PNFKKDNWRK ALDISDANIQ KLAQKSVVVA NGENTTVAKD TSATGDITYK VNVKLDEYAK STDIDTKLGD YVKSVTGDDF IKVDATKKQS PALSLDTDKL ANDSTFVTNI AGNKVFKNTY VTNENLEKGY TKLDGTNLFK DNTLNELNPN FKKDNWRKAL DISDANIQKL AQKSVVVANG ENTTVAKDTS ATGDITYKVN VKLDEYAKST DIDTKLGDYV KSVTGDDFIK VDATKKQSPA LSLDTDKLAN DSTFVTNIAG NKVFKNTYVT NENLEKGYTK LDGTNLFKDN TLNELNPNFK KDNWRKALDI SDANIQKLAQ KSVVVANGEN TTVAKDTSAT RRHNL
|
| |