Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1350 |
Symbol | carB |
ID | 5409596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1281471 |
End bp | 1284731 |
Gene Length | 3261 bp |
Protein Length | 1086 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640871027 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_001406899 |
Protein GI | 154148753 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.501423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAA GAACAGATAT AAAAAATATT TTACTTATAG GTTCGGGTCC GATTATTATC GGTCAAGCGT GTGAGTTCGA TTACAGCGGC ACTCAAGCTG CAAAAACACT TAAAAAATTA GGTTATAGAG TTGTATTAAT CAATTCAAAT CCGGCTACTA TTATGACAGA TCCTGATTTT GCGGACGCTA CTTATATAGA GCCGATTACA AAAGAGAGCA TTTTAAAAAT TATAAAAAAA GAAAAAATTG ATGCGATTTT ACCTACTATG GGTGGACAAG TTGCGTTAAA TGTCGCTATG GAAGTATTTG AAAGCGGTGA ATTTGGCGAT GTAAAATTTC TTGGCGCAAA ACCGGAAGCA ATAAAAAAAG GCGAAGATAG AGTCGCTTTC AAAGAGGCGA TGCTAAAAAT CGGTATGGAT TTGCCGAAGT CGGAATATGC TTACAATATG GATGAAGCTA TGAATGCGGC AAATGATATC GGTTTTCCTG TTATGATTAG AGCAAGTTAT ACTTTAGGCG GCGCAGGAAG CGGTGTGGCT TACAATATCG ATGAGTTTAA AGAACTTGCT CAAAATGGCA TTGAAATCAG CCCGATACAT GAAATTTTAA TTGAAGAGAG TCTGCTTGGT TGGAAAGAGT TTGAAATGGA GGTTATAAGG GATCATAAAG ATAACTGTAT AATTGTCTGT TCTATAGAAA ACCTCGATCC GATGGGTGTT CACACTGGAG ATAGTATCAC GGTAGCGCCT GCTCTTACAT TAACGGATAA AGAGTATCAA AAAATGCGCG ACGCCTCTTT TGCAATTTTG CGAGAAATCG GCGTTGATAC AGGCGGAAGT AATGTTCAAT TTGCAATCAA TCCAAAAAAC GGCAGAATGA CTGTAATCGA AATGAATCCG CGCGTTTCAA GAAGTTCTGC GCTTGCCAGC AAAGCAACCG GTTACCCGAT TGCAAAAGTG GCAACTATGC TTGCAGTCGG CTTCAGTCTT GATGAGATTA AAAATGACAT CACGGGTACA GCCGCAAGTT TTGAACCGGT AATTGATTAT ATCGTTACAA AAATTCCGCG TTTTACATTT GAAAAATTTC CGGGATCAAA TCCGTATCTT GGCACTTCAA TGAAGAGCGT CGGCGAAGTT ATGGCGATAG GTCGCAGTTT TAAGGAGAGT ATTCAAAAAG CGCTTTGCAG TTTGGAAAAA AATTTATGCG GTTTTAATTG CTTGAATTTA AGCGAAAACG ATCTTGTTTT TGGTCTTAGA AATCCGCAAG AAAAGAGAAT TTTATATGTC GCGCAAGCAT TTCGCGACGG TTTCAGTATA GATGAAATTT ATGAATACAC AAAAATCGAT CCGTGGTTTT TACAACAAAT AAAAGAGATA GTAGAGTTTG AATCTAAAAT CGATATGGAT ATTATAAATA ATGCCGAGCT TTTACGAAAA GCTAAAACTA TCGGTTTTTC AGATAAAATG ATAGCAAAGC TTGTAGATGA AAAAGATAAT CTTGAGCTTA CTCAAAATGA TATATATTTT GCAAGACTTC GTCAAAACAT CACGCTTGAA TATAACGAAG TTGATACGTG CGGTGGCGAA TTTAAAGCGC TCACTCCATA TCTTTATTCA AGCACGAATA TTACGCCTGG TTTGCCGGCG TCTGCTACAA AAAACGAAAA AAAGGTGCTT ATAGTAGGCG GCGGACCAAA TAGAGTAGGG CAAGGAATAG AGTTTGATTA TTGCTGCGTG CATGCAAGTT ATGCTCTAAA AGATATGGGA ATTACAACGA TAATGTATAA CTGTAATCCT GAAACAGTCA GCACGGATTA TGATACCAGC GATATTTTGT ATTTCGAACC GATTGATTTC GAACATTTAA GAAGTGTAAT AGAGCGTGAA AAACCTGACG GTGTAATCGT GCATTTTGGC GGTCAAACTC CACTTAAATT CGCAAAACGC TTAAATGTGA TGGGCGCTAA AATCATAGGC ACAAGTGCGC GCACAATCGA TATCGCAGAG GATCGCAAGA AATTCAGCGA ATTTATAAAG CATATAGGTG TAAAACAGCC TAAAAACGAT ACCGCTATAA GCGAAGCTGA AGCTATTGAA AAAGCGGCGA AAATAGGTTA TCCGGTGCTT GTGCGCCCTA GTTATGTTCT TGGCGGCAGA GCTATGAGAC GTGTATATAA TGAAAATGAA CTTAAAGAGT ATATGAATGA GGCTGTAAAA GTCAGTTACC ACTCTCCTGT TCTGCTTGAT AAATTTTTAA TTGATGCTAC CGAACTTGAC GTTGATGCGA TAAGTGACGG CAAAGACGTA TATATAGGTG CTATTATGGA GCATATCGAA GAGGCCGGCA TTCACTCGGG AGATAGTGCA AGCATATTGC CGCCTATGAG TTTGAGCGAT GAGATGATTG ATAATGTAAA TTCCGTTACA AAAGAGATTG CTCTTAGTTT AGGTGTAATC GGGCTTATGA ATATACAATT TGCTATTTTT GAAAATGAAC TTTATATGAT CGAAGTAAAT CCGCGCGCAA GCAGAACTGT TCCGTATGTA AGTAAAGCGA CCGGAATTCC GATGGCGAAA GTGGCGACTC GCGTTATGTG GCAGGGAAAT TTAAAAGAAG CGCTTAAATT TTATGATGAA TTCGGCGTTT TGTTTGAAGA AAAAGGCATT TTAAAACCGC GAGTTTCAAA CCATATTTGC GTAAAAGAGA GCATTTTTCC GTTTAATAAA CTTCAAGGGG CGGATCTTAT TTTAGGACCT GAGATGAAAA GCACGGGAGA AGTTATGGGA ATAAGCGAAA ATTTCGCAAA AAGCTTTGCA AAAAGTCAAA TAGCTGCAAA CAATGTGCTT CCAACGAGCG GAAACGTTTT TGTCTCTCTT GCGGTTCATG ATAAACTTCG TGCAGCCGAG CTTGCAACCG AGCTAATTAA AATCGGCTTT AAAGTTGTGG CAACAAGCGG TACTTGCAAA ACATTAAGAG ATGCTGGCAT TGAATGCGAG TTTGTATATA AAATCAGTGA AGGTCGTCCA AATATCGAAG ATAAGTTGAA AAACGGCGAA ATTTCGTTAG TTATAAATAC AAGTGACAAT AAATCAAATA CAAACGATGC CGCTAAAATT CGCCAAAGCG TTTTACGTTT TAAATTGCCG TATTTTACGA CAGTACGCGC GGCACTTGCT GCTATTCACT CTGTAAAAGC TATGAAAGAC GGCTCAGCTT ACGAAGTAAA ATCTTTGCAA GAGTATCTTA AAGAAAAATA A
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Protein sequence | MPKRTDIKNI LLIGSGPIII GQACEFDYSG TQAAKTLKKL GYRVVLINSN PATIMTDPDF ADATYIEPIT KESILKIIKK EKIDAILPTM GGQVALNVAM EVFESGEFGD VKFLGAKPEA IKKGEDRVAF KEAMLKIGMD LPKSEYAYNM DEAMNAANDI GFPVMIRASY TLGGAGSGVA YNIDEFKELA QNGIEISPIH EILIEESLLG WKEFEMEVIR DHKDNCIIVC SIENLDPMGV HTGDSITVAP ALTLTDKEYQ KMRDASFAIL REIGVDTGGS NVQFAINPKN GRMTVIEMNP RVSRSSALAS KATGYPIAKV ATMLAVGFSL DEIKNDITGT AASFEPVIDY IVTKIPRFTF EKFPGSNPYL GTSMKSVGEV MAIGRSFKES IQKALCSLEK NLCGFNCLNL SENDLVFGLR NPQEKRILYV AQAFRDGFSI DEIYEYTKID PWFLQQIKEI VEFESKIDMD IINNAELLRK AKTIGFSDKM IAKLVDEKDN LELTQNDIYF ARLRQNITLE YNEVDTCGGE FKALTPYLYS STNITPGLPA SATKNEKKVL IVGGGPNRVG QGIEFDYCCV HASYALKDMG ITTIMYNCNP ETVSTDYDTS DILYFEPIDF EHLRSVIERE KPDGVIVHFG GQTPLKFAKR LNVMGAKIIG TSARTIDIAE DRKKFSEFIK HIGVKQPKND TAISEAEAIE KAAKIGYPVL VRPSYVLGGR AMRRVYNENE LKEYMNEAVK VSYHSPVLLD KFLIDATELD VDAISDGKDV YIGAIMEHIE EAGIHSGDSA SILPPMSLSD EMIDNVNSVT KEIALSLGVI GLMNIQFAIF ENELYMIEVN PRASRTVPYV SKATGIPMAK VATRVMWQGN LKEALKFYDE FGVLFEEKGI LKPRVSNHIC VKESIFPFNK LQGADLILGP EMKSTGEVMG ISENFAKSFA KSQIAANNVL PTSGNVFVSL AVHDKLRAAE LATELIKIGF KVVATSGTCK TLRDAGIECE FVYKISEGRP NIEDKLKNGE ISLVINTSDN KSNTNDAAKI RQSVLRFKLP YFTTVRAALA AIHSVKAMKD GSAYEVKSLQ EYLKEK
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