Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1345 |
Symbol | |
ID | 5409172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1274621 |
End bp | 1275400 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640871022 |
Product | CjaC |
Protein accession | YP_001406894 |
Protein GI | 154148557 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000213382 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TATTTTTGGC ATTTGCACTT TTGTGTGTTA GTTTGTTTGC CGAAACCGTG AAAGTAGGTA TGGATAAAGA GTATCCGCCG TTTAGTTATT TGAATAATGG TGTAATGGCG GGATTTGAAG TCGATTTACT AAAAGAAATT GCATCGCAAA CAGGTATTAC AATTGAATTT GTACCGATGA TTTTTGATGA TATTTTTAAT GAAGTTGAAA GCGGTCATAT TGACGTAGGC TGCGGTGCTA TAGATATTAC TCCGGAAAGA CAGGAAAGGT TTGATTTTTC TATACCTTAT AATCGCACTG CCGATATTTA TGTCACAGAA GCGACAAATA AAAATTTAGT CGGTCCAAGT GATTTAAAAG GTAAAAAAAT AGGCGTGCTA ACTGCCGGCA GTAAGCAAGA GAAAGTTGCC AGAAGCATAC CTGATGCAAA AGTTATTATA AATGCAAGTT TGGCAAATTT GTTGATTTCA GTTAAAACAG GCAGGATAGA TGCTTGTATA ATCGAATCGA TAAATGCTCC TGCTGTTCTT GGAAACGGAT ATGATTTTGC CTCTTCAAGC GATAAAATGG CTATGGATAC ACTTAAAAGT TTTGGAATGG ACTCTAAACT TGAAATTTTT TATATAGATA CGGCTTCTGC TATGCAACAA GGTATGATTG TTAAAAAAGG AACAAGGTCT GATTTATTAA ACAAAATAAA CAGCGCAATA GATAATCTTA AACAAAGCGG TAAAATAGAT TCAATGCTAG CAAAATACGG TTTGAAATAA
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Protein sequence | MKKLFLAFAL LCVSLFAETV KVGMDKEYPP FSYLNNGVMA GFEVDLLKEI ASQTGITIEF VPMIFDDIFN EVESGHIDVG CGAIDITPER QERFDFSIPY NRTADIYVTE ATNKNLVGPS DLKGKKIGVL TAGSKQEKVA RSIPDAKVII NASLANLLIS VKTGRIDACI IESINAPAVL GNGYDFASSS DKMAMDTLKS FGMDSKLEIF YIDTASAMQQ GMIVKKGTRS DLLNKINSAI DNLKQSGKID SMLAKYGLK
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