Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1334 |
Symbol | |
ID | 5408982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1266291 |
End bp | 1267079 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640871011 |
Product | hydrolase with alpha/beta fold |
Protein accession | YP_001406883 |
Protein GI | 154148267 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.706412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTTTCT TTCCAAAATC GCTGGAGCAA AATTTTGCTT GGAATTTTAA TGATAAATTT GATGAATTTT TTATTTATGT CGGTGACGAA ATTTTTAATC AAAAAAGTGT TTCATTAAAT TTAATCGCGT TTCGTGCTGA GAATCCGAAA GGAGCTGTGC TGTTTTTGCA TGGAAATGCC GGAAATTTAG GCGATTTCGC GCATTTTCGC AATATATTTT TGAAACACGG ATTTGATTTT TATGTTTATG ATTATAGAGG TTTTGGGAAA AGCGGCGGAC GAATTTATAA TTCTTATGAA CTTTTTAACG ACGCCGGGAA AATTTTTGAG TTTATGAAAA ATGATTTTGT AAAGCGAAAT TTAGATTCAA CTAGTCAAAC GGATATGACT TCAAAATATC AAAAAAACAA TTTTATTATC ATAGGGTATT CTATAGGCAG CGGTATAGCA GCAAATATAG GCACACAAAT GAAAGTTCAT ACTATACTTA TAGCGCCTTA TTTTTCGCTA CGTGAATTAG CGGTTCAAAA GCTTCCTTTT GTGCCGTCTT TTTTAGTGCG ATATGATATA AAAACCAATG AATATTTGCA AAAAAATTGT TGCGCAAAAT CATTTAAAAT AGACATAATA TATGCTGAAT TTGATACGCT GATTCCACCT GTAAATGCTT TAAGACTTGC AAAAATTGCA CCGAATGCGC GAGTTTTCGA AGTGATGGCC GGACATAATG ATATTTTGTA TAATCCTAAA ATGAATGAAA TTTTTGATGA AATTTTGACT CAAAAATGA
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Protein sequence | MIFFPKSLEQ NFAWNFNDKF DEFFIYVGDE IFNQKSVSLN LIAFRAENPK GAVLFLHGNA GNLGDFAHFR NIFLKHGFDF YVYDYRGFGK SGGRIYNSYE LFNDAGKIFE FMKNDFVKRN LDSTSQTDMT SKYQKNNFII IGYSIGSGIA ANIGTQMKVH TILIAPYFSL RELAVQKLPF VPSFLVRYDI KTNEYLQKNC CAKSFKIDII YAEFDTLIPP VNALRLAKIA PNARVFEVMA GHNDILYNPK MNEIFDEILT QK
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