Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1080 |
Symbol | |
ID | 5408661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 1015578 |
End bp | 1016762 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640870765 |
Product | MacA |
Protein accession | YP_001406638 |
Protein GI | 154149493 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TTATAAAATT CGGTATATTT TGCGCGCTAG CGCTGATTTT GATATGGTTT TTCTTATTTA AAAAAGACGA AGAAGCACCA AATTTCATAA CTACAAAACT GCAATCAGGT GACATAAAAA GCGTAGTAAT TGCAAACGGC GAAGTATATG CTCAAGATCT CGTAGATGTA GGCGCGCAGG TAAGCGGTCA AATCAAAAAA CTATACGTCA AAGTCGGAGA CAACGTAAAA AAAGGCGATA TGATTGCGCA AATAGATTCA GAAAAACAGG AAAATGAAAT ATCAAAAGAA AAAGCACAAC TTGTAATTTA TGAGGCTAAT TTAAAGGCGG CTGAAATTAA AGCGCAAAAC GCTAAAATAC AGTTTTTAAG AGAGCAAAAA CTTTATAAAA AAGATGCCAC TTCAAAAGAA AAACTTGAAA ACGCTAAGAA TGAAGCTGCG CTTTCAGCTG CAAATGTAAA ACAGATACAA GCTCAAATAG AGCAAACAAA ACTGGCTTTA GATACCGCCG AAACAAATCT AGGATATACA AAAATATCAG CTCCGCTTGA TGGCACTATA GTCTCGGTTC CTGTAGAAGA AGGACGAACA GTAAATGCGA ATCAAACTAC ACCTACAATC GTAAAAATCG CCGATTTATC AAAAATGGAA ATTCGTCTGC AAATCTCTGA AGGCGATATC TCGCTCGTAA AAGTCGGACA AAATGTCGAA TACACAATAC TTTCGGCGCT TGATGATATA AAAAAAGCTG AAATTTCAAG CATAGATCCA GCTCTTACCA CACTTAGTGA CGGGAGTTAC GATAAAACAA ACTTAAACGG TTCAAGCTCT TCAAATGAAG CTGTTTATTT TTATGCCAAA GTACTTGTAG ATGATAATGA CGGTTTCCTA AAAATCGGTA TGACAACACA AAATACAATA ATAGTAAATG AAGCTAAAAA CGTAAATTTT ATCACTTCAT CAGCCATTCA AAAAGATACA AACAATGAGC GCTTCGTATG GATTTTAAAA GATAAAACTC CAACAAAAGC TAAGATAAAA ATCGGCATAA GCGACAATTT AAATACCCAA ATCTTAAGTG GTATAAATAA AAACGATGAA ATTATAATAT CAAATCCAAA TAAAAGTGAA AATTCTAAAA GCATAGCAAG ACCGCCATTT GAAAGAGTAA GATGA
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Protein sequence | MKKFIKFGIF CALALILIWF FLFKKDEEAP NFITTKLQSG DIKSVVIANG EVYAQDLVDV GAQVSGQIKK LYVKVGDNVK KGDMIAQIDS EKQENEISKE KAQLVIYEAN LKAAEIKAQN AKIQFLREQK LYKKDATSKE KLENAKNEAA LSAANVKQIQ AQIEQTKLAL DTAETNLGYT KISAPLDGTI VSVPVEEGRT VNANQTTPTI VKIADLSKME IRLQISEGDI SLVKVGQNVE YTILSALDDI KKAEISSIDP ALTTLSDGSY DKTNLNGSSS SNEAVYFYAK VLVDDNDGFL KIGMTTQNTI IVNEAKNVNF ITSSAIQKDT NNERFVWILK DKTPTKAKIK IGISDNLNTQ ILSGINKNDE IIISNPNKSE NSKSIARPPF ERVR
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