Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0990 |
Symbol | |
ID | 5409616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 930956 |
End bp | 932980 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640870677 |
Product | UvrD/REP helicase |
Protein accession | YP_001406551 |
Protein GI | 154147886 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.771752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT TAAATAACGA ACAATATGCC GCTGCGACCG CGCCAATGGG ACACAATCTA ATAATAGCAA GCGCAGGAAC CGGTAAAACT TCGACGATAG TGGCGCGTAT TTCGCATCTT TTAAGTTTAG GTGTAAATCC AAAAAAAATT TTACTTTTAA CTTTTACAAA TAAAGCTGCA AATGAAATGA TATCGCGTTT ATCGATGAAA TTTGACGAAA AAATAACTTC GCAAATAACC GCAGGAACTT TTCATTCCGT TTCTTATTCT TTGCTTAAAA AGTTGAATAA AGGCGTAGTA TTGAAGCAGC CGAGCGAACT TAAAATTTTA CTGAAATCAA TTGCGGCAAG GCGAAGATTT GATCATATCA GCGATGTAAA ACCGTATGGC GGAGTGTATC TTTATGATAT TTATTCGCTA TTTCAAAATA AAGAGTTAAA AGAAAATTTC AGCGATTGGT TTAGCAAAAA CTATGAAGAG CAGGCGGCTT TTTCCGATAT TTATGCCGAT ATTCTTGAAG AATTTGAAGC TCAAAAGGCT AAATTCGGTT ATGCTGATTT TAACGATTTA CTGATTAGAA TGCGAAAAGA GCTTATAAAA GGTGCACCGG TTGCATTCGA TGAAATTTTG GTTGATGAGT ATCAGGATAC AAACACGCTT CAAGGTTCAT TAATTGATTC TTTTAATACA AAAAGTCTAT TTTGCGTTGG CGATTTCGAT CAAAGCATTT ATGCGTTTAA CGGTGCAAAT ATCAACATAA TAGGCTCTTT CGGCATGCGT TATAAAGACG CTAAAGTGTA TAATCTGAAT ATAAATTATC GCTCATCATC TCAAATTTTG GCGCTTGCAA ATCGTGTCAT TTCAAACAAC GAAAGACTTT ATCCAAAAAA GCTTATAGTT GGCAGAGAAG GCAATTTTAA AAACCCTAAA TTATATATTT ACGATGAAAT TATGTCGCAA TATAAAAGCG TGGCGCAGAT GATACATAAA CTTTTACAAA ACGACACAAA AGGCGAAAAT ATCGCCGTGA TTTTTCGCAA TAATTCAAGC GCAGACGGTA TTGAAATCGC GTTAAGAGAG CTTGAAATAC AAAGCAAAAG AAAAGGCTCT ATTAGTTTTT TTGACAGCAA GGAAGTTAAA GCGGCTACAA ATTTGCTTGC GATTTTAGTA AATCAAAAAG ATATAATGTC TTTTATAAAT CTTTGCGAAT ATGGTGCTAC AATCGGCGCT GCAATGAGTA GGGAGCTGTT TGAAATTTTT ACAAATATAG GGCATAACTC TATTGTAAAC GGATTTTTAT GCCCTGATAT GAATGTGCAA ATTTTACCAA AAAAACGTAA AAACGTTCAA CTTGGACTTT TCGACGATGA ATTTTTCGGT TCGGCGTCAA GATTTGGGGA TTTAGGTTTT TATAATGAGT TTGCGAAAAA TCCTGTGTTT AAATTTGAAA GACTGACCGA ACTTGGAGCG AAATTTTTAT ATAAAATTTA TAAATTTCTT AAAAGTGTGC GAAATTTCGA TGATACCGAT GAAATTTTAA AAAACATTCA AAATAGCGAA ATTTTTGCTC ATATAGCGGA TTTTTTAGCT ACAAAAAGAG CTACACAAAG AAACGGCAAA TTGGATGAAA TTCGTAAAAA AGATGAAATA ACAAAAATTT ACAATAAACT TGAAATTTTA AATGAAATTG CGCTTAAATA TCCAAATGCC GAGCGTTTTT ATAATTTTTT AACAATCGGA AGCAAAGAGA TTGATGAAGG CGAGGGCGTT AATTTACTTA GCGTACATGC AAGTAAAGGG CTTGAGTTTG ACGCTGTTTT TGTGGTTGAT TTAGCGCAAA ACCGTTTTCC AAACACAAAA TTAATGTTAA CAGGCGGAAA TATTGAAGAA GAGCGCAGGC TTTTTTATGT AGCCGTTACA AGGGCCAGAA ATGAACTTAC GCTAAGCTTC GCAAAATTTG ATAAAATCAG AAAAATAACT TATGAAGCGA GTGTTTTTTT AAAAGAAGCG GGACTCGTAA AATAA
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Protein sequence | MKKLNNEQYA AATAPMGHNL IIASAGTGKT STIVARISHL LSLGVNPKKI LLLTFTNKAA NEMISRLSMK FDEKITSQIT AGTFHSVSYS LLKKLNKGVV LKQPSELKIL LKSIAARRRF DHISDVKPYG GVYLYDIYSL FQNKELKENF SDWFSKNYEE QAAFSDIYAD ILEEFEAQKA KFGYADFNDL LIRMRKELIK GAPVAFDEIL VDEYQDTNTL QGSLIDSFNT KSLFCVGDFD QSIYAFNGAN INIIGSFGMR YKDAKVYNLN INYRSSSQIL ALANRVISNN ERLYPKKLIV GREGNFKNPK LYIYDEIMSQ YKSVAQMIHK LLQNDTKGEN IAVIFRNNSS ADGIEIALRE LEIQSKRKGS ISFFDSKEVK AATNLLAILV NQKDIMSFIN LCEYGATIGA AMSRELFEIF TNIGHNSIVN GFLCPDMNVQ ILPKKRKNVQ LGLFDDEFFG SASRFGDLGF YNEFAKNPVF KFERLTELGA KFLYKIYKFL KSVRNFDDTD EILKNIQNSE IFAHIADFLA TKRATQRNGK LDEIRKKDEI TKIYNKLEIL NEIALKYPNA ERFYNFLTIG SKEIDEGEGV NLLSVHASKG LEFDAVFVVD LAQNRFPNTK LMLTGGNIEE ERRLFYVAVT RARNELTLSF AKFDKIRKIT YEASVFLKEA GLVK
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