Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0949 |
Symbol | |
ID | 5409406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 884642 |
End bp | 886435 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870636 |
Product | general glycosylation pathway protein |
Protein accession | YP_001406510 |
Protein GI | 154148308 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.266256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTCA AGCCAACAAA ATTTAAAAGA TTTACATTTT TTTTATTTGT TGATATTTTA ATCAGTATTC TTTCAGTATA TATCGCTTTT TTGCTTCGTT TTAGCGGCGA TATACCGAAT GAATTTTATA AAGGTGCTTT ACTTAGCACA TTTGTAATTA CGGCGTTTCG TATATTTTAT ATTTGGCTTT TTAGAATTTA TATGGTTCCA TGGCGATTTT TCGGACTTTA TGAAGCTAAA AAGCTCTTTT ATATACATTT ACTGACAGCA ATCAGTTTTA CAATTATTTT TACTTTTTTC AGCTATATAT TTAATCCTTT TCCACGCAGT GTTATCGTTA TAGACGCTGC AATTTGTTAT TTGCTTATCA GCGGAATTCG CATTTCAAAA AGAATGTTTT TAGACAGCAA AAAAGATCTT ACAAACAACG AACCTTGTTT GGTTGTCGGC GCTACGAGCA AAACTTTTCA AGTTTTAAAA GGAATGAGAA GAAAATATAT AAATTACTAT CCTGTCGGCG TAGTTGACGG TAGAGCTGAA TTGGTAGGCA CATATTGTGA AAATTTTGTA GTAAAAAGCA AAGATAAAAT TCCAAAAATC ATAAAAGAAA CAGGCGTAAA AACGGCTATT ATAGCTTTGG CGCTTGATCC GATCGATTTA AAAGATTTGT ATGATGAGTT AATCAATTAC GGTTTAAAAG ATATAAAAAT TTTTTCACTT ATTGAAAATG AAAAAGATAA AATTAGAGAT ATTTCAATTG AAGATTTACT TGCAAGAAAA CCAAAAGATC TGGATAATAA AGCAATTGAA AAATTCATAA AAGACAAAGT TGTAATGGTA ACCGGAGCCG GCGGCACAAT AGGAAGTGAA ATTTGCAAAC AATGTCTGAA ATTTGGTGCA AAACGCCTTA TAATGGTGGA TCATAGCGAA TATAATCTTT ATAAAATCGA TCAGGAAACG AATCAGGATA AGCGAAATGT TTTAAAAATG ATGAATATTA TTCATTATGA CGAATTTCGC GCTGTTTTTG AAGAATTTCA TCCTGAAGTT ATAGTTCATG CAGCTGCTTA CAAACATGTA CCGATGTGCG AATACAATCC GTTTCAGGCA ATAGAAAATA ATATTTTAGG TATGAAATAT TTGACCGATT TGGCAATTGA GTTTAAAGTT AAAAAACTCG TTTTAATCTC AACAGATAAA GCTGTAAGAC CAACCAGCAT AATGGGTACA ACAAAACGCA TTTGTGAGCT TTACGGACTA AACTCATCTA CAAATGATAC TCAAATTGTA GCAGTTAGAT TTGGAAATGT GCTTGGAAGT AGTGGCAGCG TGATTCCAAA ATTTAAAAAA CAGATTGAAA ATAACGAACC TTTAAGCGTA ACTCATCCGG ATATTGTAAG ATATTTTATG CTTGTCAGTG AAGCTTGCCA GCTTGTGCTT CAAGCAGCTT CCATCGCGAA AGGTGGCGAA CTTTTTGTGC TTGATATGGG TGAACCGGTT AAAATTGTCG ATTTGGCAAA TCGTATGCTT CAACTTGCTG GAAAACCTAA TTTGGGTATA AAATTCGTAG GACTTCGTCC GGGAGAAAAA CTTTTTGAAG AGCTTATTGT TGATGAAAAC GACAAAATGA CGGAGTATAA ATCAATTTTT GTAACGCATT CAAATAAATA TGATATAAAC AAATTAAACG AACAAATAAA AGAGCTTTTG AAACTGAAAA CAACAGATGA AATTGTAAAT TATTTAACTC AAATTGTTCC TGAATTTCAT CACAATAAAG GCGGTCAATG TTAA
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Protein sequence | MIFKPTKFKR FTFFLFVDIL ISILSVYIAF LLRFSGDIPN EFYKGALLST FVITAFRIFY IWLFRIYMVP WRFFGLYEAK KLFYIHLLTA ISFTIIFTFF SYIFNPFPRS VIVIDAAICY LLISGIRISK RMFLDSKKDL TNNEPCLVVG ATSKTFQVLK GMRRKYINYY PVGVVDGRAE LVGTYCENFV VKSKDKIPKI IKETGVKTAI IALALDPIDL KDLYDELINY GLKDIKIFSL IENEKDKIRD ISIEDLLARK PKDLDNKAIE KFIKDKVVMV TGAGGTIGSE ICKQCLKFGA KRLIMVDHSE YNLYKIDQET NQDKRNVLKM MNIIHYDEFR AVFEEFHPEV IVHAAAYKHV PMCEYNPFQA IENNILGMKY LTDLAIEFKV KKLVLISTDK AVRPTSIMGT TKRICELYGL NSSTNDTQIV AVRFGNVLGS SGSVIPKFKK QIENNEPLSV THPDIVRYFM LVSEACQLVL QAASIAKGGE LFVLDMGEPV KIVDLANRML QLAGKPNLGI KFVGLRPGEK LFEELIVDEN DKMTEYKSIF VTHSNKYDIN KLNEQIKELL KLKTTDEIVN YLTQIVPEFH HNKGGQC
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