| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0692 |
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| Symbol | tolB |
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| ID | 5409397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 635659 |
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| End bp | 636912 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640870392 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001406273 |
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| Protein GI | 154148092 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00862547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TATTGTTGCT TTTTACATTT TGTGTGAGTT TATTTGCGTA TGTTGATGAT
GCTACGATGA CAATCACAAA CAAAGGATCA AATTTGCCTA AGATTGTAGT TCAAAATTCA
TCAATGATTG CAAATTCGTC TTTAAATCAA AAATTTTTTA AACTTATGGT AGGAGATTTA
AAAGTCGGCG CTACATTTGA AGTAAGCGAT GAATATTTTG AAAGCAGCTA TGACGGCGAT
TTTCGCACAA ATATATCAAG CGACAGCGGT ACAGCGTTAA TAGTTAGATA TGCTCTTAGC
GATGCTTCAC CTATGAGTTT AAAAGCAAAA GTTTTGGATG CAATTACAGG AAAAATTTTA
TATGAAAACA GTTTTTCGAT AGAAGATAAA TCCAAATTTC CGTTTCTTGC TCATGACGCC
GTTAGTGAAA TAGTCAAAAA TTTAGGATAT TCAAATGTTG ATTGGATGAG AGAAATGATA
CTTTTTTCAC GTTATACAAG CGCAAAAGAG AGCGAAATTC TTATAGCTGA TTATACATTG
ACATATCAAA AAACAGTTGT AAGAGGTGGA TTGAATATAT TTCCAAAATG GGCAAATAAA
GCACAAAATG CGTTTTATTA TACATATTAT ATAAATAAAA ATACACCTGC TATTTTTAAA
TACAATCTTT CAAACGGAAG TAAAAGTAAA ATTTTCACAG GTAGAGGTAT GACAATAGCA
AGCGATGTAA GCGATGATGG AAGCAAGCTT TTGATTACAA ATGCCCCAAA AGACCAACCG
GATATTTTTC TATATAATCT TAATAGCGGC TCTATGAAAC AAATTACGAA TTATCCCGGA
ATTGATGTAA ATGGAAATTT TGTTGATAAT GATAGCAGAA TTGTTTTTGT TAGCGACAGA
CTTGGATATC CGAATATTTT CGCGCAAAGT ATAGATGGCG GAAATGTCGA GCAAATGGTT
TTTCAAGGTA AAAATAACAA TTCAATCAGC ACACACGGTA ATTATATAGT TTATTCAAGT
CGCGATGGCG GCGGAAGCTT TAATATTTAT TTGATTTCAA CAGGCACAAA TCTTATTCGT
CAACTTACAG CAGACGGCAA AAATATGTTT CCAAGATTTT CAAGTGACGG TGGAAGCGTG
ATGTTTATAA AACATTCTAA TTTTGGCAGT TCTATCGGAA TAATAAGAAT AAATGAAAAT
AAAAGTTTCC AATTCCCACT AAAAATCGGG CAAATTCAAT CAGTTGATTG GTAA
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| Protein sequence | MKKLLLLFTF CVSLFAYVDD ATMTITNKGS NLPKIVVQNS SMIANSSLNQ KFFKLMVGDL
KVGATFEVSD EYFESSYDGD FRTNISSDSG TALIVRYALS DASPMSLKAK VLDAITGKIL
YENSFSIEDK SKFPFLAHDA VSEIVKNLGY SNVDWMREMI LFSRYTSAKE SEILIADYTL
TYQKTVVRGG LNIFPKWANK AQNAFYYTYY INKNTPAIFK YNLSNGSKSK IFTGRGMTIA
SDVSDDGSKL LITNAPKDQP DIFLYNLNSG SMKQITNYPG IDVNGNFVDN DSRIVFVSDR
LGYPNIFAQS IDGGNVEQMV FQGKNNNSIS THGNYIVYSS RDGGGSFNIY LISTGTNLIR
QLTADGKNMF PRFSSDGGSV MFIKHSNFGS SIGIIRINEN KSFQFPLKIG QIQSVDW
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