Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0660 |
Symbol | |
ID | 5408271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 605773 |
End bp | 606756 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640870361 |
Product | putative lipopolysaccharide biosynthesis protein |
Protein accession | YP_001406242 |
Protein GI | 154148960 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.275219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAGTTT GTTATTTCTC TTGTTCAAAT ATTTTTGGTG GTGTTGAAAA TATCATTTTG CAAACATTAA ATAAGCTTTG TAAAAGTTAT GAGGTAGCTC TTATCTTACC AAAAGGTGCT AATTTTTTAA ATAAATTTGA TAAAAGAGTA AAAATTTATG ATTATAAAAG CTACGATAAA CGTTACAATA TATTTTTATA TTTTGAGATT ATGAAATTTT TACACGAGTT TAAGCCGGAT ATTTTACACA CTCATGGGGC AAAAGCTACG CAAATGGGCT TTATTTTAAG TAAATTTTTA AAATTTAAGT TTATTGCTAC AAAGCACAAT AATAGAAAAG GTAAAATTTT TAATAAAATT AAAAATGTTA TGGCTGTTTC AAAAAATGTC GCAAATACTA TAAATCATGA ATCAAAAGTT ATCTATTTTG GTATAGATAA GCAAAATATA AAGCCGAATT TATCAAAAAC TTTTACCATT ACAGCTGTTG GTAGGCTTGA TAAAATTAAA GGTTTTGATA TTTTGATAAA TGAAGTAAAG AAGCTTAAAT TTAACTTTGT TTTACAAATT GTAGGTGATG GTTTCGAAAG GGAAAATTTG CAGAATTTAA TAAATAGTCT TAATTTAAAA AATAAAGTTA AACTTCTTGG TTTTTGTCAA AACATTCCGC AAATTTTAGC AAATTCAAAT TTACAAGTTA TTAGTTCCAT AAAAGAAGGT TTTCCACTTA CGCTTTTAGA AGGTCTTTTT TACGCTCCTA TTGTAATTTC TACACCAGTT GGTGGAATAA TTGAAATTTT AGACGATGAA TTTTTAATAA ACCATGAGAA TTTAAGTGAT AAAATAGATG AAATTTACAT GAATTATGAT GCAAAAGTTG AAATTTTTAA AGAAAAAAAT AAAAATATAA TTGAAAATTT TAAATTTGAA AAATATATCT TAAATTTGCA AAATTACTAT GAGGAAATTT ATGAAAAATC TTAG
|
Protein sequence | MRVCYFSCSN IFGGVENIIL QTLNKLCKSY EVALILPKGA NFLNKFDKRV KIYDYKSYDK RYNIFLYFEI MKFLHEFKPD ILHTHGAKAT QMGFILSKFL KFKFIATKHN NRKGKIFNKI KNVMAVSKNV ANTINHESKV IYFGIDKQNI KPNLSKTFTI TAVGRLDKIK GFDILINEVK KLKFNFVLQI VGDGFERENL QNLINSLNLK NKVKLLGFCQ NIPQILANSN LQVISSIKEG FPLTLLEGLF YAPIVISTPV GGIIEILDDE FLINHENLSD KIDEIYMNYD AKVEIFKEKN KNIIENFKFE KYILNLQNYY EEIYEKS
|
| |