Gene CHAB381_0489 details

Gene Information

• Locus tag: CHAB381_0489
• ID: 5408864
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 449725
• End bp: 451656
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640870194
• Product: putative cell division protease FtsH-like protein
• Protein accession: YP_001406077
• Protein GI: 154149469
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCAAA ATAATCAAAA CAATAAAAAT AACGGCGGTG GAAATAATTT TTTTAACAAA 
AATCCTATCG GCGCATTTAT CATTTTTGCT GTGATTATGA TAATAATTTT TAAAGCGATG 
TCGCCTGAAG GCGGTGGACT TGGAAGCGAG TTTATGAATT CCGGATCGAA TGTCAGAAAT 
GTAAGTTATT CGGAATTAAA AAATGAAATT CAAAATGGCA GCGTATCTAT GGTGTCAATC 
GGTCAAACAA ATATCAAAGC TCAATCAAAC GGGACAACCT ACATAGCAAA AAAAGTATCC 
GATAATGACC TTGTGAAAAT TTTAGATGAG AAAAAAATTC CTTACGGCGC TTATAATGAA 
AGTAATTTCT TTACGGATAT ACTTTTCAGT TGGGTAATTC CACTTGCTAT TTTCTTTGGA 
ATTTGGATGT TTCTTGTAAA TCGTATGCAA AAAAATGTAA GTGGCGGAAT TCTTGGTATA 
GGCAGCAGTA AAAAACTTGT TAATTCCGAA AAGCCGAAAG TAAAATTTAG TGATGTGGCA 
GGCGTGGAAG AGGCAAAAGA AGAAGTTAAA GAAATTGTTG ATTTTCTTAA AAACCCAGGT 
CGTTATATAA ATTTGGGTGC TAAAATTCCA AAAGGAGTTT TGCTTGTAGG GCCTCCAGGA 
ACCGGTAAAA CTTTACTTGC AAAAGCGGTT GCAGGAGAGG CTGACGTGCC GTTTTTTTCA 
GTAAACGGTT CAAGTTTTAT TGAAATGTTT GTAGGCGTTG GCGCAAGTCG TGTTAGAGAT 
CTTTTTGAAA CGGCTAAAAA AGAGGCCCCG GCAATTGTAT TCATAGATGA AATCGATGCA 
ATCGGTAAAA GTCGTGCAGC AGGCGGTTTT GGCGGTGGAA ACGATGAAAG AGAACAGACA 
TTAAATCAAC TTTTGGCTGA GATGGACGGT TTCAGTTCTG ATGCAAATCC TGTTATAGTT 
TTAGCAGCTA CAAACCGTCC GGAAGTCCTT GATGCTGCAC TTTTAAGACC AGGAAGATTT 
GATAGACAAG TGCTTGTCGA TAAGCCTGAT TTTAAAGGAC GAATTGAAAT TTTAAATGTG 
CATAGCAAAG ATATTAAACT TTCTAAAAGT GTGGATTTGG AAGAAATCGC AAGACTTACT 
GCAGGACTTG CCGGAGCCGA TTTAGCGAAT ATCATAAATG AAGCTGCGCT TTTGGCAGGA 
AGAAACGAAA AAAATTATGT TGAACAAAAC GATTTGGTTG AAGCCGTAGA GCGCGCAATT 
GCAGGGCTTG AGAAAAAATC ACGCCGCATA AATCCAAAAG AAAAACGAAT AGTTGCTTAT 
CATGAATGCG GACACGCGCT TATCAGCGAA ACTACAAAAG GAGCTGATAA GGTTACGAAA 
GTTTCTATAA TTCCACGCGG TTTGGCAGCT CTTGGTTATA CATTAAATAC GCCTGAAGAA 
AATAAATTTT TGATGCAAAA ATACGAGCTT TACGCGATGA TCGATGTCTT ACTTGGCGGA 
CGTGCAGCCG AAGAGATCTT CATAAAAGAA ATTTCAACAG GAGCCAGCAA TGATTTGGAA 
CGCGCAACGG ATATCGTAAA ATCAATGGTT AGTATGTATG GAATGAGTGA TTTGGATATT 
GCGGGACTTA TGGTACTTGA AAAGCAAAGA AATATGTTTT TAAACGGTGG TCAAGCGATT 
AAAGATTATA GCGATGATAT GGCTAAAAAG CTTGATGATT ATGTCAAACA AACGCTTGAC 
GAGCGTTATA AAAGTGTCTT GGAAACTTTG CAAACTTACG CAGGTGCAAT TGAAGAGATG 
GTAAAAGCGC TTTACGAAAA CGAGACAATC GAGGGTGAAA AAGTGCGTGA AATCATTAAA 
AATTTTGAGA TTAAAAACGG TTTTCCTTCA CGTTTGCAAC AAGATGATGA AAAAGGCGAG 
GACGATTTAT GA 

 

Protein sequence

MDQNNQNNKN NGGGNNFFNK NPIGAFIIFA VIMIIIFKAM SPEGGGLGSE FMNSGSNVRN 
VSYSELKNEI QNGSVSMVSI GQTNIKAQSN GTTYIAKKVS DNDLVKILDE KKIPYGAYNE 
SNFFTDILFS WVIPLAIFFG IWMFLVNRMQ KNVSGGILGI GSSKKLVNSE KPKVKFSDVA 
GVEEAKEEVK EIVDFLKNPG RYINLGAKIP KGVLLVGPPG TGKTLLAKAV AGEADVPFFS 
VNGSSFIEMF VGVGASRVRD LFETAKKEAP AIVFIDEIDA IGKSRAAGGF GGGNDEREQT 
LNQLLAEMDG FSSDANPVIV LAATNRPEVL DAALLRPGRF DRQVLVDKPD FKGRIEILNV 
HSKDIKLSKS VDLEEIARLT AGLAGADLAN IINEAALLAG RNEKNYVEQN DLVEAVERAI 
AGLEKKSRRI NPKEKRIVAY HECGHALISE TTKGADKVTK VSIIPRGLAA LGYTLNTPEE 
NKFLMQKYEL YAMIDVLLGG RAAEEIFIKE ISTGASNDLE RATDIVKSMV SMYGMSDLDI 
AGLMVLEKQR NMFLNGGQAI KDYSDDMAKK LDDYVKQTLD ERYKSVLETL QTYAGAIEEM 
VKALYENETI EGEKVREIIK NFEIKNGFPS RLQQDDEKGE DDL