| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0476 |
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| Symbol | secD |
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| ID | 5408933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 435121 |
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| End bp | 436701 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640870181 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001406064 |
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| Protein GI | 154148251 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TAACTTACAG GCTGATTGCA TTTTTAATAG CAGCCGTTTT TTCGGTAATA
TTTTCTATGC CGTCAATTTT TCAATTTGAA AAAGGGCATA AAATAAATCT TGGGCTTGAT
TTGCAAGGCG GAATTCATAT GCTTTTGGAA GTTGAAGTTG ATGAAGCTAT AACTTCAAAG
ATAAAATCTC TCGCAGCAAG TCTAAGCTAT TCGGCTAAAA AAGATGATCT TTTACTTGAC
GATATAAAAA TTGAAAAAAA TTATTTTGAT TTTTCTATAC TTGATCCTGA TGAAGCTCCA
AAATTTGAAG CGATTTTAAA AGATATGAAA GGCATTGTTA TTGATAAAAA TGTACAAAAT
TATCATATCA GCTTAGATGA AAAAGAGATT GAAGCAACAA AAACTTATGC AGTAGAACAA
GCGGTCGAGA CGATAAGAAA CAGACTGGAT CAATTCGGTC TTGCCGAACC TACTATCGCA
AAACAGGGAA AAGAGTATAT TCTGGTTGAA CTTCCGGGAA TCAAGACGCA AGAAGATGAA
CAACGAGCAA AAGATCTTAT TGCAAAAGCG GCTCACTTGC AACTGATGGC TCTTGACGAT
GTTCGCCAGG ACAGAGCTCA AAGTATTTCA ATGGTAGAAG CTAAAAGTTA TGGAGATGTA
ATATATCCTG ACGTAAAAAA TGAAAGCGTA AAATACCTTA TAAAAGAAAT TCCTGTTTTA
GACGGAGCAA TGTTAACCGA TGCAAAAGTT GCATTTGATC AAAAAACAAA TCAACCGATT
ATAAATTTTA CATTAAATAG TGAAGGTGCT AAAATTTTCG GCGATTTCAC CGGAGAAAAT
GTCGGAAAAA GACTTGCAAT AGTTCTTGAC GGTAAAGTTT ATAGCGCACC TAGAATAAAT
GAAAGAATAG GCGGCGGAAG CGGTCAAATA AGCGGAGGAT TCAGTGTCGA AGAAGCTCAC
GATGTAGCAA TTGCGCTTAG AAGCGGCGCA CTTTTGGCTC CTGTAAAAAT GAGCGAAATT
CGTTCAGTAG GTCCAAGCCT CGGGCAAGAC AGTATAGATC AAAGTATGGC GGCCTTAATG
GGCGCAAGCG TTTTGATTGT ACTTTTTATG ATTTTTTATT ATGGTGTGGC AGGAATTTTT
GCAGATATCG CTCTTGTTAT AAATATTTTG TTTTTGATAG CTTGTATGGC GCTTTTTGGA
GCTACACTAA CATTACCTGG AATGGCAGGA ATTGTCCTAA CCGTAGGAAT GGCTGTAGAT
GCAAACGTAA TTATAAACGA ACGTGTGCGT GAAGTTTTAA GGAGTGGCGC AAATATAAAG
CAAAGTATAG AAAAAGGCTA CGAAAATGCA ATGAGTGCGA TAATTGATTC AAACCTTACC
ACGCTTATAA CATCAATGGC ACTTTATGCT TACGGCACCG GTCCTGTTAA AGGGTTTGCT
GTTACTATGA GTATCGGTAT CATAGCTTCC ATGATAACCG CAATTTTAGG AACACATGGA
ATGTTTGAAC TTATAATGGA TAAAATGTTG AAAAAAGGAA GCACAAGACT TTGGTTCGGT
TATAAAGTGA GGAAAGCATA A
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| Protein sequence | MNKITYRLIA FLIAAVFSVI FSMPSIFQFE KGHKINLGLD LQGGIHMLLE VEVDEAITSK
IKSLAASLSY SAKKDDLLLD DIKIEKNYFD FSILDPDEAP KFEAILKDMK GIVIDKNVQN
YHISLDEKEI EATKTYAVEQ AVETIRNRLD QFGLAEPTIA KQGKEYILVE LPGIKTQEDE
QRAKDLIAKA AHLQLMALDD VRQDRAQSIS MVEAKSYGDV IYPDVKNESV KYLIKEIPVL
DGAMLTDAKV AFDQKTNQPI INFTLNSEGA KIFGDFTGEN VGKRLAIVLD GKVYSAPRIN
ERIGGGSGQI SGGFSVEEAH DVAIALRSGA LLAPVKMSEI RSVGPSLGQD SIDQSMAALM
GASVLIVLFM IFYYGVAGIF ADIALVINIL FLIACMALFG ATLTLPGMAG IVLTVGMAVD
ANVIINERVR EVLRSGANIK QSIEKGYENA MSAIIDSNLT TLITSMALYA YGTGPVKGFA
VTMSIGIIAS MITAILGTHG MFELIMDKML KKGSTRLWFG YKVRKA
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