| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0400 |
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| Symbol | cas |
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| ID | 5408799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 362913 |
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| End bp | 363620 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640870108 |
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| Product | CRISPR-associated protein Cas6 |
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| Protein accession | YP_001405999 |
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| Protein GI | 154148681 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000306576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGATAT ATGAACTGAA TGTTACTGTA AAACTTAAAA AAGCTGTCAA ATTCTCACAA
ATTCCTGGAT TTCTTAGTAA AAATATAAAT TACTCTTTTT TACTTGATAA AAATTTAAAA
AATTTGCATT CCAAAAACCA TATAAAACCT TATTCTTTAA GTTTTTTACA ATCACACGAA
GGAAGAAAAG ATCTGTTTGA TGTAAATGAA ATCGCATTCT TTAAAATAAG AAGCGTTTTT
CCTGAATTCA TTGAAAGTAT GAAATATTGC CTTGAAAATA GTAAAGGGTT TGATTTTCAA
GTTTTAGGCA CTCTGACTAC TGATTTTGCA CCGACAAATA TACAAAGTCT TTACACTATG
AGTCCCGCCG TCGTTACAAT CAGCATTGAT AATAAATCTT ATTGCTGGAC TAAAAAAGAT
AGCGATATCT TAACTCTTAA AAATTCGCTT GAGACAAATC TTAAAAATAA GTTCTCACTT
TTTGTAAATG ATAGCGTTTC TTTTAATGAT GATATTATCG AACTTATTGA GATAAAAAAC
GATAAGCCGT TTATGTTTCC TTATAAAGGC GGCAAAATTT TCGCATACCG CTATAAGGTA
TATTTTGCAA ATAATTCATA CGCAAGAGAG CTTGCCAAAA TTGCATTAGC TCTAGGTCTT
GGCGAAAAAG GAAGTCTGAC ATTCGGCTTT TGCGAAAAAG GAAGATAG
|
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| Protein sequence | MLIYELNVTV KLKKAVKFSQ IPGFLSKNIN YSFLLDKNLK NLHSKNHIKP YSLSFLQSHE
GRKDLFDVNE IAFFKIRSVF PEFIESMKYC LENSKGFDFQ VLGTLTTDFA PTNIQSLYTM
SPAVVTISID NKSYCWTKKD SDILTLKNSL ETNLKNKFSL FVNDSVSFND DIIELIEIKN
DKPFMFPYKG GKIFAYRYKV YFANNSYARE LAKIALALGL GEKGSLTFGF CEKGR
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