Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0397 |
Symbol | cas5h |
ID | 5408265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 359682 |
End bp | 360395 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640870105 |
Product | CRISPR-associated protein Cas5, hmari subtype |
Protein accession | YP_001405996 |
Protein GI | 154148469 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0193705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTT TAAGCTTTAA ACTTAGCGGA AAATTTGCAT TTTTTAAAAA ACCTGACGTT AATGAACATG TATATTTCTC ATACAATAAC ATTCCAAAAC CAACTCTGCT TGGTCTTTTA GGAGCTATAA TCGGACTTGG CGGCTATGCG AAAGAATGCG AACTTGGTAA CAGAAACAAC CCTGAGTTTT ATGAAAAATT AAAGTATCTT AAAATCGCTT TAATCCCGCT TGCAAAATTT GGAAGATTTA ATAAAAAAAT CCAGACTTTC AATAACGGTG TCGGTGCCAA TCAGGATGGA AATTTAATCA TAAAAGAACA ATGGCTTGAA AATCCGGCCT GGCAAATTTT GATAAAAGAT GATAAAAGTG ATGAATTTTC CAAAATATCA AAATTTTTAA TGGAAAAAAA GGCGATTTTT ATACCATATC TTGGTAAAAA TGATCACTTT GCAAGCATAA GCGAAGTCAA AATTGTAAAT TTGGATGAGT TTAAAGAAAA AAAAGGCGAA ATTATCTCGC TTGTTTTAGA AAAAAACGTT AAAAATCCTG GAAGGAACCC AAGTAAAGAC AGTTTTATAT TTAGCGAATA TTATCCGATC GGATTTGATG AAAATGGCTT TTATACGTTA GAAAAAACAA TCTTTACAAA TCAAACTTAT GAGATTGGCG ACGGATTTTA CAAATACAAA GAAAGCGCGA TATGTTTTCT GTAA
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Protein sequence | MKALSFKLSG KFAFFKKPDV NEHVYFSYNN IPKPTLLGLL GAIIGLGGYA KECELGNRNN PEFYEKLKYL KIALIPLAKF GRFNKKIQTF NNGVGANQDG NLIIKEQWLE NPAWQILIKD DKSDEFSKIS KFLMEKKAIF IPYLGKNDHF ASISEVKIVN LDEFKEKKGE IISLVLEKNV KNPGRNPSKD SFIFSEYYPI GFDENGFYTL EKTIFTNQTY EIGDGFYKYK ESAICFL
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