Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0351 |
Symbol | |
ID | 5408392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 317169 |
End bp | 318149 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640870060 |
Product | secretion protein HlyD |
Protein accession | YP_001405953 |
Protein GI | 154149454 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATT TCAAAACAAG AATTATAATT TATGCCGTTT TGTTGGTTAT TTTACTTGCG GCTTTTAAGC TTTATACATT TTATTCGTTG AATAACGGCG AGATTTTCTA TGGAAATATC GACCGCCAGA CGCAAGCTCT CTCTTTTGAA TTTCCCGGTC GAATTAAAAA TCTTTTAAAA GATGAAGGAG ATTTTATCAA AAAAGGTGAA GCGTTAGCCG TTTTGGATGA TGAATATCTG CAAAACGCTC TTGTTCAGCT TGATGCACAA ATCGCGCAGA ACAAAGCCAT TTTAGAAAAA CTTGAAAACG GCTACAGATA CGAAGATATC GATCAGGCAA AGGCTGAAGC GGCTAAAAGC GAAGCAAATT TAAACGAAGC TAAAAAAACT TTCGAACGCC AAAAGCAACT TTTAAATACA AACTCTACAT CAAAACAAAA TTTCGATACC GCAAAGGCGA AATTTGAACT TGCAGTCGCA GCGGCGAGTG CAGCCAGATC AAATCTTTCA AAACTTGAAA ACGGCTACGA AAAACTTGAT ATAAAGGCGC AAAAATCGCT TGTGGAGTTG CTTGAAGCAA AACGCGAAAA GATAAATATA GATCTTAAAA ATTCAGTTAT CGTTGCGCCG AATAATGGCA CCGTTCTTAC AAAATTTAAA GAAAACGGCG AAAATGCCGG AGCCCATGAA CCTGTTTATG AGATTGCAAA AGTTGATGAT TTTTGGGTCA GAGCTTATGT GGATGAAAAA AATTTAGGCC TTTTTAAAGT TGGCGATAAA ATGGAAATTT ATACCGATTT TAGAGAAAAA CCATATGCCG GACATATCAG TTTTATAGCG ACGGTTTGTG AATTTACGCC AAAAAATGTC CAAACAATCG AGCTTAGAAC AAATTTAGTG TATAGATTTA AAGTAAATTT TGACGAGATT GACGACAAAA TCAAACAAGG CGTTCCCGTA CACGTTAAAA AAGTAAAATG A
|
Protein sequence | MKNFKTRIII YAVLLVILLA AFKLYTFYSL NNGEIFYGNI DRQTQALSFE FPGRIKNLLK DEGDFIKKGE ALAVLDDEYL QNALVQLDAQ IAQNKAILEK LENGYRYEDI DQAKAEAAKS EANLNEAKKT FERQKQLLNT NSTSKQNFDT AKAKFELAVA AASAARSNLS KLENGYEKLD IKAQKSLVEL LEAKREKINI DLKNSVIVAP NNGTVLTKFK ENGENAGAHE PVYEIAKVDD FWVRAYVDEK NLGLFKVGDK MEIYTDFREK PYAGHISFIA TVCEFTPKNV QTIELRTNLV YRFKVNFDEI DDKIKQGVPV HVKKVK
|
| |