| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0175 |
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| Symbol | virB |
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| ID | 5408324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 155856 |
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| End bp | 156785 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 640869889 |
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| Product | P-type conjugative transfer protein VirB9 |
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| Protein accession | YP_001405783 |
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| Protein GI | 154148925 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.455783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAAAT TTATATTTTT ATTTATAATA TTTTATTCAA CTCTATTTGG AATAAGCATA
CCAAAAATAT CAAAATTTGA TAATAGAATA ACTTTTGCAA CATATAACGC AAATGATGTT
TTTCAGGTTA ATTGCAAAAA TGGTTTTGTT ACTATGTTGG AATTTAGCAA AGATGAAAGA
ATAATAAATA TAGCTACTGG TTTTAGTGAT GGTTGGGAAT TAATAGATAG AGAAAATTTT
TTATTTATAA AACCAAAAGC ATATATCATA AAACAAGAAG AACAAGTTTT AGCAGATCAA
AATGGCGATG AAGTAGAATT ACAAAATAAT GCAGTTATAC AACCAAATTC TACAGATTGG
AAAACAAACC TTATAGTCAC TACAAATGAA AGAATTTATG TATTTGACTT AGAAATCATA
GAAGATAAAG ATATAAATTA TAAGGTAGAA TTTTCATATC CTGATGAAAT CAAACAAAAA
CAAAAAGACA AATTGGCAGA AGAAAAAAGA ATAAAAGAAG TTCAAAAAAA TAAAGAAAAT
ATTGAAAACG AACTTAATAA AGTTACTATC CCTAAAAACT GGGATTTTTT AATGCATATT
AATAAAGGAA GTGACACAAT TTCACCAGAT TTTGCATACG ATGATGGAGT TTTCACATAT
TTAGGCTTTA ACAATACAAA AACTATTCCA TCTGTTTTTT TATATGAAAA TGTAAATAAA
AAATCAAAAG AAAGTATTTT AAATACACAT TTAAAAAAAG ATGGAAATTA CGATGTATTA
GTAATTCACA AAACAGCTCA GAAAATACTT CTTAGAAGTG GTGATAAATT AGTTGGAATT
TTCAATAATG GATATGCTAA AAATCCGCTT GATAAAACAT ATAACACTAT AAATAGAAGC
GTAGAAAGAG AGATTATAAA AGATGAGTAA
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| Protein sequence | MHKFIFLFII FYSTLFGISI PKISKFDNRI TFATYNANDV FQVNCKNGFV TMLEFSKDER
IINIATGFSD GWELIDRENF LFIKPKAYII KQEEQVLADQ NGDEVELQNN AVIQPNSTDW
KTNLIVTTNE RIYVFDLEII EDKDINYKVE FSYPDEIKQK QKDKLAEEKR IKEVQKNKEN
IENELNKVTI PKNWDFLMHI NKGSDTISPD FAYDDGVFTY LGFNNTKTIP SVFLYENVNK
KSKESILNTH LKKDGNYDVL VIHKTAQKIL LRSGDKLVGI FNNGYAKNPL DKTYNTINRS
VEREIIKDE
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