Gene CHAB381_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0158 
Symbol 
ID5409249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp135408 
End bp136292 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content26% 
IMG OID640869873 
Productzeta toxin superfamily protein 
Protein accessionYP_001405767 
Protein GI154148179 
COG category[S] Function unknown 
COG ID[COG4185] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00432306 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATT TAAAAAAATT ATCAAATTTT ACTACACAAG ATGTTAATAA TATTTCAAAT 
AATGAATGGG ATAAAATTTC AAAATCGTGT CATCGCCAAA ATAAAACTCC AAAACTTTAT
TTGGTTGGTG GACAGCCTGG TGCTGGTAAA TCAACTACTA TTTCAAAAAT TGAAGACTCT
ATGCAAGGAA ATTGTGTAGT TATAAATTTA GATGATTATA GAGCTTTACA TCCAAATGCA
AGAGAAATTT ATGAAAAAGG TGCAAAAGAT AGTGATGATT ATTCAATCTA TACAAATCCA
TTTATGAGAG AAGTTGGCGA AAAACTTATC GATAAGGCTA TAGAAAATGG TTATAACGTC
ATACTGGAGC GAACTTTAAG CTCAACCGAT ACAGTAAGCA AACAATTAGA TAAATTTAAG
GAAAATGGAT ATGAGTTAAA TCTATATGTA GTAACTTGCA ATAAAAATCA TAGCATAAGC
TCAGCTGAGC AAAGATATTT AAATGGAAAA ATAGGATATG AAAAAGGAAT TTTTGCGGAT
CCACCACGTA AAATTTCAAA AGAATTTCAA AAAGAATGTC ACGAAAATTT AGGAAAATCA
ACACAAACAT TAGCACAAAA ATATGATTTT AAAGATATAA AAATTATATA TAGAAGTCTA
CAATATAAAC AACATTGTGT TTTTGACAAA AATGATAAAA CTAAATTACA CAATATTGAT
AAAATAGATA AGTTAATTAC TCGTGTGTTA AATGGCAAAA ATAAAGAAAA AGCAATTACA
AACGAAGAAT TAAATAATAT AAAAAATAAA ACAATTCAAG CAGTAGAAAA TATTTTTAAC
AATAAAACAA AAATTAACAA AGAAAATAAT ATGGAAATAA AATAA
 
Protein sequence
MTDLKKLSNF TTQDVNNISN NEWDKISKSC HRQNKTPKLY LVGGQPGAGK STTISKIEDS 
MQGNCVVINL DDYRALHPNA REIYEKGAKD SDDYSIYTNP FMREVGEKLI DKAIENGYNV
ILERTLSSTD TVSKQLDKFK ENGYELNLYV VTCNKNHSIS SAEQRYLNGK IGYEKGIFAD
PPRKISKEFQ KECHENLGKS TQTLAQKYDF KDIKIIYRSL QYKQHCVFDK NDKTKLHNID
KIDKLITRVL NGKNKEKAIT NEELNNIKNK TIQAVENIFN NKTKINKENN MEIK