Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0135 |
Symbol | |
ID | 5409312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 117385 |
End bp | 118542 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640869854 |
Product | bacteriophage-related integrase |
Protein accession | YP_001405748 |
Protein GI | 154149149 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.566608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TAGAAAAAAA TAAAAATATA TATGTTCATA AAGGTAGATT TTATGTTGAT TGCCAAAAAG ATGGTGTTAG AATACGCCGT TCTACTGGTC TTAAAAAATC AGCTCTAGCT TTTAATTATA TTCGCCAAAA TTACGAGATG TTTCTTGGCT CTCGTGTAGA GTTAGAACAG GCTCAGCGTG AATATTATGA ACTTGAGGAT GAGCAGGTTG ATCGCAGACT AAGAAAAGGG AAAGAAAGTA CTACACCCAT AAAAAATACG AGCGAGTTTA GCTTTGATAA TGTTATTGAT AAAGTCTTGC AAGAGAAATC GTTTTTAAAA GATAAAACTG TTAATTTTTA TCGTACGATG AGCAATGTTG TTAGTGATTT TTTGGAAAAT AAAAATATTT ACTACCTATC TGATTTTGAA AGGCATCATA GTGTTGAATT TGTGCAGTAT TGCAAAGATA GGGGCTTAAA GGATAGCTCT ATTAGTGGAT ACTGCTCTTT TTTTAAAATG TTGTTTCGTT ATGCTATTAA TAATGATTTA ATTTCTAAAA ATCCATTTTT TATTCCTAGA TTTAAACAAA AATATGAACC ACAAGAAACT GATAAATTTG TACCATTTAG TCTTGATGAG ATTTTAACTC TTATTAGGAA TGCTGGTGAT GAAGAGCTTA GATTATTTTT AGTTGTTGCA TTCTTTACTG GTGCTAGAAC TGGGGAGATT TTTGCTCTTA CTTATGCGGA TCTTGATTTT AAAAATAGGC AAATTCGCAT CAATAAAACT CTTTCTGATT TAGGTGTTAT TGATTCACCC AAAACCAAAT CAAGCAATAG AGTTATTGAT ATGCTTGATA TAGTATATAA AGAGCTTATA AAGCTTAATA ATGCCCATAA AGATGAACAA ATTTTTAAGC TGTCTCGCTC TATGATTAGA GTTAAATTCA ACAATTTGCA AGAAAAACTT GGCTATAATA AACGTAGGCT TTACGACACT CGCCACTCTT TTGCTTCTGT AATGCTAAGT CGTGGTGAAG AGCCTATGTG GGTTGGTTGC AAAATGATGG GACATAAGGA TTTAAATGAA ACTTATCGCT CTTATGCCAA ATATCTACCC AAAGAAGTTA AAAAAAGAGC CACTTTTTTA AATGATGTTG TCATATAA
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Protein sequence | MKNLEKNKNI YVHKGRFYVD CQKDGVRIRR STGLKKSALA FNYIRQNYEM FLGSRVELEQ AQREYYELED EQVDRRLRKG KESTTPIKNT SEFSFDNVID KVLQEKSFLK DKTVNFYRTM SNVVSDFLEN KNIYYLSDFE RHHSVEFVQY CKDRGLKDSS ISGYCSFFKM LFRYAINNDL ISKNPFFIPR FKQKYEPQET DKFVPFSLDE ILTLIRNAGD EELRLFLVVA FFTGARTGEI FALTYADLDF KNRQIRINKT LSDLGVIDSP KTKSSNRVID MLDIVYKELI KLNNAHKDEQ IFKLSRSMIR VKFNNLQEKL GYNKRRLYDT RHSFASVMLS RGEEPMWVGC KMMGHKDLNE TYRSYAKYLP KEVKKRATFL NDVVI
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