| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0130 |
|---|
| Symbol | nrfH |
|---|
| ID | 5408992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 111515 |
|---|
| End bp | 112057 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640869849 |
|---|
| Product | cytochrome c nitrate reductase, small subunit |
|---|
| Protein accession | YP_001405743 |
|---|
| Protein GI | 154147870 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR03153] cytochrome c nitrate reductase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAATA AAAACGGCTC GCAAACAGAG CAAAAGACCA AAAAACGCTC TTTTTCCATA
GCTTTATTTA TTATAATCAT CAGTTTTGGC GTGATTATAG GTCATGGACT TTATACTTTT
GTCTATGCCG AAGGTTTTTC ATATTTCAGC GACGATCCCG CTGCTTGCAA AAACTGTCAC
GTGATGAATC AGGTATATGA AAGCTGGCAA AGAGGCGGAC ACCAAAATGC GGCTACCTGT
AATCAATGTC ACGTTCCGCA TGAGTTTTTT TCAAAATGGA TAATGAAAGC AAAAAGCGGA
CTTCATCACG GATATGCTTT TACTTTCAAA GATAATCCTG TTGCATTTTC AGCGACACAA
GAGAGCAAAC AGATTGTACA ACAAAACTGT ATCTCTTGCC ACAAAGACGT ATCGGCAAAT
TCAATTTGCG GTGCAAATGT CGCTACAGTA GGAAATGACG GCAGATTAAA ATTACCTGCC
AAAAATGAAG AATTAAGTTG CGTTAGCTGC CATAAGCAAG CAGGCCACGC ACATAATTAT
TAA
|
|---|
| Protein sequence | MENKNGSQTE QKTKKRSFSI ALFIIIISFG VIIGHGLYTF VYAEGFSYFS DDPAACKNCH
VMNQVYESWQ RGGHQNAATC NQCHVPHEFF SKWIMKAKSG LHHGYAFTFK DNPVAFSATQ
ESKQIVQQNC ISCHKDVSAN SICGANVATV GNDGRLKLPA KNEELSCVSC HKQAGHAHNY
|
|---|
| |