Gene CHAB381_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0123 
Symbol 
ID5409099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp104752 
End bp106065 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content29% 
IMG OID640869842 
Productfibronectin/fibrinogen-binding protein 
Protein accessionYP_001405736 
Protein GI154147985 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.884669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC AAAATTTATT GCAAATAGCG GAATTTTTAC AAAAATTCCA TAAAATTTCA 
AACATAAAAC GAGTCGGAGA TAATCTTTTT TACATAGTTT TTGATGATTA TGAGCTGTTT
TTCGATCTTG GAAAAACTCA CTCAAATATA CATAAAAACG AGAATTTCAC GCCGAATAAA
ATTTACAAAG CCCCGTTTGA TCTGATTTTG GAAAAACGTT TTGTTTCGGC TAAAATTTCA
GCCGTTGAAG TTCCAAAAAA CAATCGCATA CTTCATATTT GCGCCACTTT AAACGGAAGC
TATAAAAAAA TTATTTCACA TATTTATTTT GAATTTACGG GGCGATTTAC AAATGTAATA
ATAACAGATG AAAATAACAT TATTTTGGAA GCTTTAAGGC ATTTTGAAAA TGAGTTCAGA
AATATAAAAG TCGGTGTGAA ACTGAAATTT TTACCAGGTA TAGAAATTCG AGAAAAAACG
GTAGAAAAAA TAGAAAATTT TGATATTTTT TTTAAAAATG AGTTTAATAA TATAAAAAAT
TTGCAATTTG AAAATTTACG CACCGCCAAA ATTTTATCGG TAGATAAAAA AATAGAAAAT
TTTTCGCAAA ATTTATGCGA ACTTCCAAAG GAGGAGGAGC TTTTAAAAAA TGCCGCGGAT
TTTAAACTTA AAGGTGAAAT TTTAATTGAA AATCTTTACA AATTAAAAGA TTTTGATAGA
AAAATTTCAA TTTATAAGAA TGACAAAAAA ATTGAGTTTT CTTTTGAAAA ACCGCCGAAA
ATTTCGGCAA ACGATTTTTT CACGACTTCT AAAAAACTTC GCCAAAAAGC AGCGAATTTA
TATATCCAAA GGCAAAATTT AGACGAACAG CTAAAATTTT GGCAAAACTT AAAAACATTG
ATTTTAAACG CAAAAAACGG ACAGGAGCTT GAAATTTTAC TTCCAAAACA CGAAATAACC
GCACAAAAAA AAGAAAAAAA CAACCAAAAC GTGCAAAACT TTTATATAGG AGAATTTAAA
ATAAGTGTCG GTAAAAACAA AATCGGCAAC GAATGGCTAC TTAAAAACTC GGCTAAAAAC
GATTTCTGGT TCCATATAAA AGATATACCG GGGGCCCACG TCATTGTAAA AACTGCAAAA
CAAAACTTAA CGCCGGAAAT CATAGAAATG GCAGCAAAAA TTTGCGTAAA TTTCAGCGTA
AATACACCTG GAAATTTCAA TGTGGATTAC ACAAAAAGAG GCTTTGTACG TGTAGTTGAA
AGTGCGTTTG TAAATTACAA TAACTTTAAA ACAATAAAAA TTTTAAAGCC ATAA
 
Protein sequence
MKYQNLLQIA EFLQKFHKIS NIKRVGDNLF YIVFDDYELF FDLGKTHSNI HKNENFTPNK 
IYKAPFDLIL EKRFVSAKIS AVEVPKNNRI LHICATLNGS YKKIISHIYF EFTGRFTNVI
ITDENNIILE ALRHFENEFR NIKVGVKLKF LPGIEIREKT VEKIENFDIF FKNEFNNIKN
LQFENLRTAK ILSVDKKIEN FSQNLCELPK EEELLKNAAD FKLKGEILIE NLYKLKDFDR
KISIYKNDKK IEFSFEKPPK ISANDFFTTS KKLRQKAANL YIQRQNLDEQ LKFWQNLKTL
ILNAKNGQEL EILLPKHEIT AQKKEKNNQN VQNFYIGEFK ISVGKNKIGN EWLLKNSAKN
DFWFHIKDIP GAHVIVKTAK QNLTPEIIEM AAKICVNFSV NTPGNFNVDY TKRGFVRVVE
SAFVNYNNFK TIKILKP