Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0113 |
Symbol | pncB |
ID | 5409489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 96035 |
End bp | 97465 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640869832 |
Product | putative nicotinate phosphoribosyltransferase |
Protein accession | YP_001405726 |
Protein GI | 154148015 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG CGCTGCTTAC CGATTTTTAT CAACTTACAA TGATGCAAGG TTATTTTTTT GAAAAAAAAG ATGATGTTGC GGTTTTTGAT ATGTTTTATC GTAAAAATCC ATCAAATGGT GGATATGCGA TATTTTGCGG TGTCAATGAA GTAGTTGATT ATATTAAAAA TTTAAGATTT AGCGATGATG ATATTAAGTA TTTAAAAAGT TTAGGGACTT TTAAAGACGA ATTTTTAAAT TATTTAAAAA CTTTTAAGTT TAACGGCGAA ATTTATGCCG TTGAAGAAGG AAATATAGTT TTTCCGCACG AACCGTTATT ACGCGTAAAA GCAAATATTA TGGAAGCCCA ACTGATTGAG ACCGCAATTT TAAACATTTT AAATTTTCAG ACGCTAATCG CAACAAAAAG CTCACGTATT TGCAAAGCCG CAAACAACGA TTTGGTTATG GAATTCGGAC TTAGAAGAGC TCAAGACAGG AGCGCCGGAA TTTATGGCGC TAAAGCGGCT GTCATAGGCG GTTGCGGCGG AACGGCAAAT GTTTTGGCGG CAAAAATGTT TGACATAAAA CCGCTTGGAA CACACTCTCA CTCGTGGATT CAAAGTTTTG ACAATGAAAT AGATGCGTTT AGAGCTTATG CTAAAATGTA TCCGAATACC GCACTTTTGC TCGTCGATAC ATATGATACG CTAAAAAGCG GCATTCCAAA CGCCATTAAA GTTTTTAAAG AACTTCGCGC AAACGGACAC GAACCGCTTG GAATTCGTAT TGATTCGGGC GATTTGGAAT ACTTGACGAA AATAGCGCGT AAAATGCTTG ACGAAGCCGG TTTTAAAAAT GCAAAAATTA CAGCTTCAAG CGATTTGGAC GAATATTCTA TCGAACAACT TAAACTTTTC GGTGCTAAGA TAGATTCTTG GGGAGTCGGC ACCAGACTTA TCACATCACA TGACAGTCCA AGTTTAGGTG GTGTTTATAA ACTTTCAGGC ATCGAACGAA ACGGAAATTT TGAACCGAAA ATTAAAATTT CAAATGATCC GCGCAAGATA AATAACCCTG GATACAAACA AGTTTATAGA CTTTATGATA AGGATAATGG CAAAGCGGTT GCAGATTTGA TTACGCTTGC CGATGAAAAA ATAGATGAAA GCAAATCGCT TGAAATCTTC CATCCGCTTT ATACGTATCG CCGAAAGAAA GTTGAAAATT TTACGGCTGA ACCTTTACTG AAACCACTTT TTATAGACGG CAAATTTGTA GGAAACAAAC GAAGCGTAAT GGAAATCGCA AAATATAGCA AAGAGCAAAA GGCGCTTATT TGGGATGAAT ATCTAAGAAA CATCAATCCG CAAGTTTATA AGGTCGATAT GTCAAACAAA CTTTGGAATT TGCGCGAAAA ATTAATCAAT TCACATAAAA ATTTTAATTA A
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Protein sequence | MSEALLTDFY QLTMMQGYFF EKKDDVAVFD MFYRKNPSNG GYAIFCGVNE VVDYIKNLRF SDDDIKYLKS LGTFKDEFLN YLKTFKFNGE IYAVEEGNIV FPHEPLLRVK ANIMEAQLIE TAILNILNFQ TLIATKSSRI CKAANNDLVM EFGLRRAQDR SAGIYGAKAA VIGGCGGTAN VLAAKMFDIK PLGTHSHSWI QSFDNEIDAF RAYAKMYPNT ALLLVDTYDT LKSGIPNAIK VFKELRANGH EPLGIRIDSG DLEYLTKIAR KMLDEAGFKN AKITASSDLD EYSIEQLKLF GAKIDSWGVG TRLITSHDSP SLGGVYKLSG IERNGNFEPK IKISNDPRKI NNPGYKQVYR LYDKDNGKAV ADLITLADEK IDESKSLEIF HPLYTYRRKK VENFTAEPLL KPLFIDGKFV GNKRSVMEIA KYSKEQKALI WDEYLRNINP QVYKVDMSNK LWNLREKLIN SHKNFN
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