Gene CHAB381_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0052 
SymbolaroK 
ID5409399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp47155 
End bp47667 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content32% 
IMG OID640869774 
Productshikimate kinase 
Protein accessionYP_001405673 
Protein GI154148531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ACATCGTTTT AATAGGTTTT ATGGGTGTCG GCAAAGGAAC CGTAGCAAGA 
GCGTTGGCAC GTGAACTTGA TATTTTTTCG ATTGATTGCG ATGATTTAAT AGAAAGTTTT
GCCAACAGAA AAATTTCAAA AATTTTCGCG GATGACGGAG AAACAAAATT TCGTGAAATT
GAGAAAAAAT TGGCTAATTT TTTACAAAAT AGTGTTAGTG GCGCCATAAT TTCAACCGGT
GGTGGATTTT ATAAAGTTCC GAATTTAAAA GACATCGGAG TGATAATCTA TTTGAAATCG
GACTTTGACA GCATAATAAA AAGAATTAAA AAGTCTCCAA ACGCAAAAAA AAAGCTGGCT
AAACGTCCTC TTCTTAAAAA CTTAAAAAAA GCGAAAATAC TTCATAACCA AAGAGATGCG
GAGTATGAAA AAGTAGCCGA TTTCACAGTA GACGTAAGAA AAAAATCTTT GCAAGAAATT
GTAGAAGAGA TACAAAATTT AATTAAAGAA TAG
 
Protein sequence
MKNNIVLIGF MGVGKGTVAR ALARELDIFS IDCDDLIESF ANRKISKIFA DDGETKFREI 
EKKLANFLQN SVSGAIISTG GGFYKVPNLK DIGVIIYLKS DFDSIIKRIK KSPNAKKKLA
KRPLLKNLKK AKILHNQRDA EYEKVADFTV DVRKKSLQEI VEEIQNLIKE