| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0043 |
|---|
| Symbol | |
|---|
| ID | 5408416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 39647 |
|---|
| End bp | 40639 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640869766 |
|---|
| Product | nitrogen fixation protein NifU |
|---|
| Protein accession | YP_001405665 |
|---|
| Protein GI | 154148924 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA ACAATTTAAT AAACGGTTCA ATTTGGGATG AATACTCTCA AAAAGTTCAA
GACAGAATGA ATCACCCGAG ATATATGGGC GAAATCACTG AAGAAGAGGC AAAAGCAAAA
GGTGCGAAAC TTATAGTTGC TGATTTTGGC GCTGAAAGTT GCGGAGATGC CGTTCGTCTT
TATTGGCTGA TAGATGAAAA AACGGATAAG ATAATCGATG CAAAATTTAA AAGCTTCGGC
TGTGGCACTG CAATAGCAAG TAGTGATACA ATGGCCGAAT TATGCATAGG AAAAACGGTT
GACGAGGCTG TAAAAATCAC AAATTTGGAC GTTGAACGCG CTATGCGTGA CAATCCGGAA
ACCCCGGCAG TTCCGCCTCA AAAAATGCAC TGTTCTGTCA TGGCTTATGA TGTCATAAAG
CAAGCCGCGG CTAATTATAG AGGTATTGAT CCTGCACATT TTGAAGATGA AATTATAGTA
TGCGAATGTG CCAGAGTAAG CCTTGGTACT ATAAAAGAAG TAATCCGTTT AAATGATCTT
AAAACCGTGG AAGAGATTAC TGAATACACA AAAGCCGGAG CATTTTGCGG AAGCTGTATA
AAACCGGGCG GGCATGAAAA GAGAAACTAT TATCTGGTTG ATATTTTAGC ACAAACAAGG
GCTGAAATGG AGCAGGAAAA ATTAAAAGCC GTAGCTGATG CAAAAACTGC ACAAAAATCG
GTAGATCTTA GCTTTGATGA ACTGAATATA ATCGGAAAAT TTAAGGCCGT TGAAGATGTT
ATTGATAAAG AAATTCGACC TATGCTTGCG TTTGACGGCG GAAATTTGGA CATTGTCGAT
ATAAAAAATG CAGACGACGG TAAAACAGAC ATTTATATTC GATATCTTGG AGCTTGCAGC
GGTTGTTCAA GCGGAGCGAC AGGCACGCTT TATGCGATAG AAAATGTATT GCAAGAGAAT
TTAAGCAACA ATATTCGCGT TTTGCCAATC TGA
|
|---|
| Protein sequence | MAKNNLINGS IWDEYSQKVQ DRMNHPRYMG EITEEEAKAK GAKLIVADFG AESCGDAVRL
YWLIDEKTDK IIDAKFKSFG CGTAIASSDT MAELCIGKTV DEAVKITNLD VERAMRDNPE
TPAVPPQKMH CSVMAYDVIK QAAANYRGID PAHFEDEIIV CECARVSLGT IKEVIRLNDL
KTVEEITEYT KAGAFCGSCI KPGGHEKRNY YLVDILAQTR AEMEQEKLKA VADAKTAQKS
VDLSFDELNI IGKFKAVEDV IDKEIRPMLA FDGGNLDIVD IKNADDGKTD IYIRYLGACS
GCSSGATGTL YAIENVLQEN LSNNIRVLPI
|
|---|
| |