Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1518 |
Symbol | |
ID | 4538629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1495832 |
End bp | 1496713 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639746877 |
Product | TPR repeat-containing protein |
Protein accession | YP_892652 |
Protein GI | 118474870 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00160085 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAG ATCTTTTTAT AGCAGCCTTT TTATGGGCTG CATCTTCTTT ATTCGCTGAA ATTTCAGTAT TTGATGCAGG TAATTTAAAT CAAGATAATC CGTATGGACT TACAGATAAT GAAAAGATTC TACTAAAAAA CAAAGAAAAA GTTGAAAAAT TAAACCAAAA TATCGGCTCA GTTCAGTCTG ATATAAATGT AGCACAAGAG AATATCGAAG GCTTAAGAAG TATCTTAGAT GGCTTAAATC AGACAAATTT AAAACTAGAA AACAGAGCCA CCGATCTAGA AAACAGAGTA AATTCTATAG ATCTAAATCT TACAAAAGAG ATTACAGAGT TAAAAAGTAT AGTAAAACAA AATAAAACTA TACAAGATGA AAATTATAAA AAAATAACTA AAGCCATATC TGAGCTAAGC GCATTGATAG ATTCGGTAGT TGCAAATCAA GCAGCGGAAA AAAATAGTAG TTCCACTATA AAAGATAACA AGATCGAAGA TACGAAATCG GTAACTAAAT TTGATGATAT GAATCTCGCA GATGTCTTAA AAGACGCCGA TACTTCTTAT AATAATAAAG AGTATTTAAA AGCTAGTGAA GCATATGCTT TTTTAGTAAA GAAAAAGCAT AAACCTGCTT ATTCAAATTT TATGCTTGGC GAGATAGAAT ACACAAATAA AAACTATAAA GATGCTATAC CGTACTACCA AAAAAGTGTT GAACTGAGTC AGAAAGGCAC TTATATGCCA AAACTTTTGT ATCATACCGC AATTAGTTTT GATAAAATAG GCGATACAAA AAATGCTAAT AAATTTTATA ATGCATTGAG ACAAGCATAT CCAGATAGTA AAGAAGCAAA AGCTTCACCG GTACGTAAAT AA
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Protein sequence | MRRDLFIAAF LWAASSLFAE ISVFDAGNLN QDNPYGLTDN EKILLKNKEK VEKLNQNIGS VQSDINVAQE NIEGLRSILD GLNQTNLKLE NRATDLENRV NSIDLNLTKE ITELKSIVKQ NKTIQDENYK KITKAISELS ALIDSVVANQ AAEKNSSSTI KDNKIEDTKS VTKFDDMNLA DVLKDADTSY NNKEYLKASE AYAFLVKKKH KPAYSNFMLG EIEYTNKNYK DAIPYYQKSV ELSQKGTYMP KLLYHTAISF DKIGDTKNAN KFYNALRQAY PDSKEAKASP VRK
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