| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1417 |
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| Symbol | |
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| ID | 4539232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | - |
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| Start bp | 1399628 |
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| End bp | 1403155 |
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| Gene Length | 3528 bp |
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| Protein Length | 1175 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639746778 |
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| Product | serine protease |
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| Protein accession | YP_892556 |
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| Protein GI | 118475456 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGT GTATATGTAT AGTTGCAGCA TCTGTGTTGC AAGTTTGTGC CGTAAGCGAT
CTTGAGCTTA TAAATGCACA AAGCGCTTAT GATGACGGGA TTACTGGTAG CGGTATAAAA
GTAGGCATTA TAGATGGCGC TGTTAGAAGC GATCACCCTA GCTTATCTGG TAAGTTGATT
GAACAAATTT ACTCAAAAGA TAAGTATGGA GCTTATACGC CTGATTTTAC TATCGATACT
CACGGTAGTC ACGTGGCTGG AATTATGGCA GGAAAGTATA TAAATGCTTC AAATCCTTAC
GGAGTAGCCT ATGATGCTAG TATTTATGCT GCGCAGATAA CGGGTCATAA TAACATAGGT
ACTCTAACTC CTCCAAATAT ATATGACTTT TTTGTCGATA AAGATGTTAG CGTTATAAAC
AACAGCTGGA ATGCAAATAT GTATCCGATA GTAAGTATGC AAGGAAGTAC TTATTACGTG
AAATCGCTAA GCTCTAGGGA TGCTAATTTT TTTATTCGTC AAGCTTATGG TAATTCAAAA
CCATCTGAAA ATCTATCAAG ATTATCAAGG GATAAAAATA CCTTAGTTGT TTTTGCTGCC
GGAAATGAGG GGATTGTTTC TCCCGGTCTT TTTGGTACGC TTCCTTATTA CGATGAGTCT
TTTCGTTCGT GGTTAGTAGT TGGTGCTTTA GATAGTGCTA ATATATCAAA AGATAGTAAC
GGAAAGATTA TTATAAGCTC TAAAGGATCT CCGGAATTTA GCAACGGACT AAAAGGAACG
CAAAATTACT CTTTGGTTGC ACCAGGAACG AATATCAATA ACGTAAATTC TCCATATATG
ATACGACCTT CTTTTGGTAG AGTCGATAGA AATCTTTATA CCAAAAAAAG CGGAACTTCA
ATGGCTGCTC CTATGGTAAG TGGTGCAGCG GCTTTGGTTG CCCAAAAATT TCCATTTCTA
AACGGTAAAG AGATAGCCGA TGTGTTATTA AGCACGGCAA ATAGAGACTA CCAAGCCCCA
AAAGTCGTCA TAAAAGAGAC TAACGGTCTT GATAGCGATA GAAATAGTCC GTATTTTGGC
ACTAAAAGAA ATTATTATGC TATATTTTAT ATAGATAACC CTATACCAAG AAAAGATGAC
GGAAGTATCG ATAAAGATCA AATCAACATT GATTTGATGA ATGCTGGTTA TGATAGAGCG
TTAGTTGCGG GATTATCACA ACTTAATAAT ATCAAATATC CTACTTTGTC ATCTCATGTA
TTAGTTGATG GTGGATACGC CGCAGTATGG GAGATAAAAA AAGAAGATAT GTTTGGGCAG
GGAATTTTGG ATGTTAAAAA GGCAATGGGT GGATTATCCG TTCTTGATGC AAATCGTTTA
AGTCATAGTG ATATCGTTCA AAATTACAAA CAAGAATCCA GCGCCGTGTA TTATAAATTA
GATACTAAAG GAATGGATGC AGAATTTAGC AATGATATCT CGCAAAGAAA ATGGGATAGT
TCAACTCACA ACGCCGGCGC TTTAAATTTA CCTATAGGGC TTGCAGATTT AAATGTTGGA
TTTATTAAAA ACGGAAACGG AGTATTGAAA TTAACCGGAG AAAATAGCTA TTTAGGTGCA
ACTATCGTTA GACAAGGTGG CTTAAATATC TCTAAAAGAG CCGACCAAAG CGGAGGATTT
ATATCAAGCA ATGTATATGT AGAAAATACA GCTAGTCTTA GCGGCGATGG AGTAATCGAT
AGGAATTTAT ATAACGATGG TATAGTAAGA CCGGGAAATC AAGATTTAAG CGATTTAACA
GTCAATGGAA CTTATGAACA AAGTAGTGCT GGCACTTTGC AGCTGGATTT CGGAGACAAG
AAAAACTCAA AGCTAATTGC TGCCAATTAT AATATACAAG GAAAACTTGA ATATATACCT
CTACCTGCTT TTTATACTAG CGGTAGTTAT GTTAGTATCG ATTTAGGCGG ATTAAAAGCG
CATTTAAACG ATTTTTCAAA TGTTGCGGTT GTCGGTAATA ACGCTATAAA TTTCATAGCG
GTTTTAGATG AAGATAAAAC TTCTATAAAT AAACCAGATC TTCCACAACT AGATATAAAT
GAGCAAGATA AAGATAATGC CGCAGATCAA AAACCAGATC AAAATCCAGA TCCGATTTTG
CCTGAGCCTG ATAAAGATCC AAATCCGAGT AATCCTGTTC ATCCTATAGA GCCGGCTCCA
AAACCGTCTG ATAAAGAAGA TAATATTTCT GGTCCGACGC AAGATGAAGT AAATAAACCG
GATCAAAATC AAGATAAAAA TCCGGATTCA AATAATAATC ACAATGACAG TGATAAAAAT
CCGGATTCAA ATAATAATTT AATTGTAACT CCTACCGTAA AACCAGATGC TTATAATAGA
CCAAATAGCG ATATCGGTGC TGCTTTAAGA GAAATTCGTT CTATGGCAAA TTTAGATAAA
CGCTATAAGG ATTATTTTGC TTTTTTAGAT AATGCGGATT CAAAAAACTT TGATAAGGCT
TTAAAAACTA TGGAGTCTAT AGATTATATG AGTAACACGG CTCAAATAGT TAACGGACAT
CATCAATTTA ATCAAAACAG TATGCTTTTT GCGTTAAATC CTACTTCTCA AGGTTTAAGT
TTAGCTCGTA ATTTTGAAAC CGAACCGATT TTGTTAGCCT CTTTAGCCTC GGATATAGCT
ATTGATCTTG GCATAAATTC ATATGATGAA AAGCGCTATA TTTGGTATAT GAGTCCTAGT
TATAAGAAGA TTAACGGAGA TAATTATAGC GGTAAATCAT ATGGTCTTAA CTTTACTATA
GGGGCAAAAC CAAGCGATAA TTCGCAGTTA ACTTTTAATA CTAGTTATTT GGAATCTAAG
TTAAATTTTG AAGATTCGAA TTCTAAGAGC AAATATGTTA ATTTCGGCTC AAATTATATT
TTGGATTTAG ATAGCGTAAA AGTCTTAAGT GGAGCTAGTT TAGGATTTGG GCGCAATACT
ATGCAAAGAG GATTGTTGGG TAGCAGCGAG ATTTTAAGCG GTAGTTATAA TAACTTTTTA
GCTTCGGCCG AATTTGGTTT GGCAAAAGAT TTAAAAATAA ACTCATTTAC CATAACTCCG
CTTTCGTATT TTAGCTATAG TTATATTTTT CAAGACTCTT TTAACGAGAG CGGAAATGTA
TTTGCGAAAT CTTATGACAA AATCAGGCAT GATAGCACGT CTATTACCGC CGGAATTAAT
CTATCGTACG ATTTGGATAA ATTTGATGTT AATACTAAGC TTTCTGGATT TGTTATTTAT
GAGTATAGAT TAAGCGGTAA GGATCTGAAA AATAGAGTTA AATTTAGAGA TTTTCAAAAT
CAAACTTTTA CTCAAAGATA TGCTTTAAAT AGAGATCTTG TATATTTAGG ATTTAGTTCG
CAGTTTGATT ATACTAACTC ATTTTTTATG CGTTTTGACC TTATAAACGA GATTGCTAAA
GATCAGTATA ATTTTAATAT TTTAGCAAAT TTAGGTTTTA AATTTTAA
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| Protein sequence | MKRCICIVAA SVLQVCAVSD LELINAQSAY DDGITGSGIK VGIIDGAVRS DHPSLSGKLI
EQIYSKDKYG AYTPDFTIDT HGSHVAGIMA GKYINASNPY GVAYDASIYA AQITGHNNIG
TLTPPNIYDF FVDKDVSVIN NSWNANMYPI VSMQGSTYYV KSLSSRDANF FIRQAYGNSK
PSENLSRLSR DKNTLVVFAA GNEGIVSPGL FGTLPYYDES FRSWLVVGAL DSANISKDSN
GKIIISSKGS PEFSNGLKGT QNYSLVAPGT NINNVNSPYM IRPSFGRVDR NLYTKKSGTS
MAAPMVSGAA ALVAQKFPFL NGKEIADVLL STANRDYQAP KVVIKETNGL DSDRNSPYFG
TKRNYYAIFY IDNPIPRKDD GSIDKDQINI DLMNAGYDRA LVAGLSQLNN IKYPTLSSHV
LVDGGYAAVW EIKKEDMFGQ GILDVKKAMG GLSVLDANRL SHSDIVQNYK QESSAVYYKL
DTKGMDAEFS NDISQRKWDS STHNAGALNL PIGLADLNVG FIKNGNGVLK LTGENSYLGA
TIVRQGGLNI SKRADQSGGF ISSNVYVENT ASLSGDGVID RNLYNDGIVR PGNQDLSDLT
VNGTYEQSSA GTLQLDFGDK KNSKLIAANY NIQGKLEYIP LPAFYTSGSY VSIDLGGLKA
HLNDFSNVAV VGNNAINFIA VLDEDKTSIN KPDLPQLDIN EQDKDNAADQ KPDQNPDPIL
PEPDKDPNPS NPVHPIEPAP KPSDKEDNIS GPTQDEVNKP DQNQDKNPDS NNNHNDSDKN
PDSNNNLIVT PTVKPDAYNR PNSDIGAALR EIRSMANLDK RYKDYFAFLD NADSKNFDKA
LKTMESIDYM SNTAQIVNGH HQFNQNSMLF ALNPTSQGLS LARNFETEPI LLASLASDIA
IDLGINSYDE KRYIWYMSPS YKKINGDNYS GKSYGLNFTI GAKPSDNSQL TFNTSYLESK
LNFEDSNSKS KYVNFGSNYI LDLDSVKVLS GASLGFGRNT MQRGLLGSSE ILSGSYNNFL
ASAEFGLAKD LKINSFTITP LSYFSYSYIF QDSFNESGNV FAKSYDKIRH DSTSITAGIN
LSYDLDKFDV NTKLSGFVIY EYRLSGKDLK NRVKFRDFQN QTFTQRYALN RDLVYLGFSS
QFDYTNSFFM RFDLINEIAK DQYNFNILAN LGFKF
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