Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0840 |
Symbol | |
ID | 4537904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 846590 |
End bp | 847258 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639746226 |
Product | transcriptional activator protein CopR |
Protein accession | YP_892015 |
Protein GI | 118474091 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.048163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA TCCTAGTCTT AGAAGATGAG CCGATGCTGC AAGATATGAT AAGTTCATAT CTTCAAAGCT TCGGCTATGA AGTAGAAGCT TCTGATAGCT ATGATAAAGC TCTAAGTATT GCTTATGAAA AAAATTTTGA TCTATTTATA TTTGATGTCA AAATCATAGG CGGTAGTGGA TTTGAACTAT TAGACGAGCT TAGATCCTCA GGAGTGGCGA CTCCTTGTAT ATTTGCCACT TCATTAAATG GTATCAATGA CGTTACAAAG GGTTTTAAAG TCGGTTGTGA CGATTATATA AAAAAGCCAT TTGAGTTAGC CGAACTTCTT TTAAGAGTAC AAAATATACT GAAACGAAAC TTTAATCACT ATGTAGATGA TAATTTTATC ATTATTAATA GTAATTTCAA ATTTGATATC CTACAAAAAA AATTGATGCA AGATGGCAAA GTTCTGCCTC TTGCTAAAAA AGAGACTGAG CTTTTATGTC TATTTTTAAA AAATAAAAAT AGAATTTTAA GCCGAGATGA AATTTATTCT CAAATTTGGG AATTTTATGA AGTACCGAGC GAACTAAGCC TAAGAGTCTA TATAAGAAAT CTTAGAAAAC TTATAGGTAA CGAAAAAATC ATAAGCCACT CAAAACTTGG ATATGAATAT GTCTCATAA
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Protein sequence | MSKILVLEDE PMLQDMISSY LQSFGYEVEA SDSYDKALSI AYEKNFDLFI FDVKIIGGSG FELLDELRSS GVATPCIFAT SLNGINDVTK GFKVGCDDYI KKPFELAELL LRVQNILKRN FNHYVDDNFI IINSNFKFDI LQKKLMQDGK VLPLAKKETE LLCLFLKNKN RILSRDEIYS QIWEFYEVPS ELSLRVYIRN LRKLIGNEKI ISHSKLGYEY VS
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