| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0737 |
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| Symbol | mfd |
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| ID | 4538564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 743444 |
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| End bp | 746401 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639746123 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_891912 |
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| Protein GI | 118474341 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00351961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGCAA GGATTTATGA GTTTTTTAAA TTTAATAAAA ATATATACGA TATCTTAGTA
ACAAATGACG ATAAAGAGGC AAGAGAAGCT TATGATAGTG CTTCTTACGC CGGACTCACT
TGTTTTGTTT TACCGGATTT TAGAGCTATA CAAGGTGATG ATTTAAGAGC TTTTAATGCA
GAACTTTTAG AAATAAGTAA AGTTCTAACT GAATTTTATA AAAGTGATTC AAAAAATAAG
CTGCTTATAT CTCCTATTCG TACGCTTTTA AATAAACTTC CAACTAGCTC AAATTTAAAA
ACCAAAACTA TAAGTTACGC AGATACGTTA AATCTAACTG AGTTTAAAGA AGAAATGCTC
GGTTTCGGAT ATAATTTCGT AGATATCGTA GAAGGCAGAG GCGAAATAAG AATAAGCGGC
GAAATTATCG ATATATTTAG CGTCTCAGAA GATAAGCCAA TTAGAATTTT GCTGGATATA
GATACTGTTT GTAGTATAAG ATACTTTGAT CTTGATACTC AAAAATCAGA CAAAAACGAG
CTTACTTCAG TTATTATAAC TCCGTTTTTG GCTTCATTAA ATAGTGATGA ATTAAAAGAT
GTAAATGATA AATTAGAAAA TATCGATTCA AATGCTTTGA TAAAAGATAT CAACTCATTT
GGTTTTTGGG TTATAGACGG ATTTAGCGAT TATTTTGAGA GTTTTAAAAC TGTTTTGGCA
ATGCAAATAG ACATAGATGA TATCGTTTCT AATAGAGATC TAAGTTTTTT AAAAGCTGCT
CCTATTTTAC CAGAACCAAA AATTTATAAA GATTTAGAAG TTAGTGTAAA TAGTGATCTT
ATCAAATTTC ACGGCAGTAA AAAAATTCAA ATTTTGAGCT CAAACGAGAG TAGTTTTAAT
GCTTTAAATT TAGAAAATAG TTCAAACGTA GAGCTTGTCA TAAGCAATCT GATATTAAAT
ATAGCTAGTA AAGACGAATT GATACTATCT TTAAATAAAA GAGTCAAAAA ACAAAGAGTT
AAAAAAGCAA GTTTAGTTAT AGATGAATTG AAAACCGGTG ATTTTGTCGT ACATAGTGAT
TATGGTATAG GTAAATTTTT AGGACTTGAG CTTATCACGG TTTTAGGTAG TAAAAAAGAG
TTTGTAGTTA TCGCTTATCA AAATAACGAT AAACTTCTTT TGCCGGTTGA ACATCTAAAT
ATGATAGATC GTTATATAGC AGGAAGCGGC GCCGTAGTTA GCGTAGATAG GCTCGGCAAG
GCTAGTTTCG CGAAAATCAA AGAAAAAGTT AGAGAAAAGC TATTTGTTAT AGCTAATAAA
ATCATAGCTC TAGCTGCAAA AAGAGAGTTG ATAGAAGGTA TAAGATTAAA CGCGGATAGT
CAGTATGCTA AGTTTAAATC CAGCGCCGGA TTTATATACA CGGATGACCA AGAAAAAGCA
GTAAATGATA TACAAAATCA TCTAAAGAGC GGACGAGTTA TGGATATGCT TTTAAGCGGC
GATGTAGGTT TTGGTAAAAC CGAAGTTGCT ATGAACGCCA TATTTTTATG CGTAAAAAGC
GGCTATCAGG CTCTATTTTT TGTACCAACT ACTTTGCTTA GCTCTCAGCA TTTCAAAAGT
TTAAAAGAGC GTTTTGATAA ATTTAACATA GATGTACGCA GACTAGATAG ATTTACTAGC
ACAAAAGAAA AATCAAATAT TATAAAAAAT TTAAATGATG CAAAACCGAT GGTTGTCATC
GGCACTCATT CTCTTTTATC TTTAAAAGCG GCGAATTTGG GACTTATAAT TATAGACGAA
GAGCATAAAT TCGGTGTTAA ACAAAAAGAA AAACTAAAAG AGATAAGCGA ACACTCTCAT
ATACTTTCTA TGTCGGCTAC TCCTATTCCA AGAAGTTTAA ATATGGCTTT AAGTAAAGTT
AAAAGTTATA GCACTCTTTT AACGCCGCCG CTTGATAGAA TGGATGTAAG AACATTTGTC
AAAGAGTGGG ATGAGAAGCT TATAAAAGAG GTTATATTAA GAGAGATTAG AAGAGGAGGT
CAGATATTTT ACGTGCATAA TTTAATATCT GATATGCCAA GTATGGAGCG AGAATTAAAA
GCTTTGATAC CGAATTTAAA AGTTTTAACG CTTCATAGTA AGATAGACGC AAAAACTACC
GAAGATGAGA TGATGAAATT TGCAAATAAA GAGTATGATC TGCTTCTTTG CACAAGTATC
ATAGAAAGCG GTATTCATTT GCCAAATGCT AATACTATTA TAATCGATGA CGCAAATAAA
TTTGGGATTG CGGATTTGCA TCAGTTAAGA GGAAGAGTCG GTAGGAGCAA TAAACAAGGC
TATTGCTACT TTTTGGTCGG CGATAAAAAT GAGCTTAGTA GTGAAGCCGT AAAAAGGCTT
ATTGCTCTTG AAAGTAATTC GTTTTTGGGC TCCGGAGCAC TTCTTGCTTA TCATGATTTA
GAAATTAGAG GTGGCGGGAA TTTGCTCGGA GAGGCTCAAA GCGGTCATAT AGAAGCTATC
GGATATACGC TTTATCTAAA AATGCTTGAA GATGAGATAA ACTTGCTTTT AAATCATCAA
ACAAAAGAGA TGACTCAAAT AGATATAAAA CTTAGCGTAA ATGCATTTTT AAATACTGAT
CTCATAAATG AAGATAGAAT CAGGCTTGAA CTATACAGAC GTCTTAGCAA ATGCCAAAAT
GTAAGTGAAG TTTATGAGCT AGGAGCAGAA ATTGAAGATA GATTTGGCAA ACTTGATGCT
TACACTAAGC AATTTTTAGA TATTATAGTC ATAAAGATTT TGGCCTGCGA ACAAGGGTTT
AAATCTGTGA GTAATTATGA ACAAAATATA AGCTTAACTA AAATTGACGA TACGAAGGTT
ATTTTAAAGT CAAGGAGTAA AGATGATGAT GACGTACTTG CACAAACTCT GGCATATTTA
AGAAAGAATT CATCATGA
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| Protein sequence | MQARIYEFFK FNKNIYDILV TNDDKEAREA YDSASYAGLT CFVLPDFRAI QGDDLRAFNA
ELLEISKVLT EFYKSDSKNK LLISPIRTLL NKLPTSSNLK TKTISYADTL NLTEFKEEML
GFGYNFVDIV EGRGEIRISG EIIDIFSVSE DKPIRILLDI DTVCSIRYFD LDTQKSDKNE
LTSVIITPFL ASLNSDELKD VNDKLENIDS NALIKDINSF GFWVIDGFSD YFESFKTVLA
MQIDIDDIVS NRDLSFLKAA PILPEPKIYK DLEVSVNSDL IKFHGSKKIQ ILSSNESSFN
ALNLENSSNV ELVISNLILN IASKDELILS LNKRVKKQRV KKASLVIDEL KTGDFVVHSD
YGIGKFLGLE LITVLGSKKE FVVIAYQNND KLLLPVEHLN MIDRYIAGSG AVVSVDRLGK
ASFAKIKEKV REKLFVIANK IIALAAKREL IEGIRLNADS QYAKFKSSAG FIYTDDQEKA
VNDIQNHLKS GRVMDMLLSG DVGFGKTEVA MNAIFLCVKS GYQALFFVPT TLLSSQHFKS
LKERFDKFNI DVRRLDRFTS TKEKSNIIKN LNDAKPMVVI GTHSLLSLKA ANLGLIIIDE
EHKFGVKQKE KLKEISEHSH ILSMSATPIP RSLNMALSKV KSYSTLLTPP LDRMDVRTFV
KEWDEKLIKE VILREIRRGG QIFYVHNLIS DMPSMERELK ALIPNLKVLT LHSKIDAKTT
EDEMMKFANK EYDLLLCTSI IESGIHLPNA NTIIIDDANK FGIADLHQLR GRVGRSNKQG
YCYFLVGDKN ELSSEAVKRL IALESNSFLG SGALLAYHDL EIRGGGNLLG EAQSGHIEAI
GYTLYLKMLE DEINLLLNHQ TKEMTQIDIK LSVNAFLNTD LINEDRIRLE LYRRLSKCQN
VSEVYELGAE IEDRFGKLDA YTKQFLDIIV IKILACEQGF KSVSNYEQNI SLTKIDDTKV
ILKSRSKDDD DVLAQTLAYL RKNSS
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