| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0728 |
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| Symbol | secD |
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| ID | 4538511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 733634 |
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| End bp | 735223 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639746114 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_891903 |
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| Protein GI | 118475690 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.347162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAG GTAGAGTAAC TTATAGACTA GTTATTTTTA TCTTAGCTCT TATATTTGGG
CTTGGCTTTT CGATGCCAAG CTTTTTACAG AGCGAAAAGG GATATAAAAT AAGCTTAGGT
CTTGACTTGC AAGGCGGCTT ACATATGCTA CTTGGCGTAC AAACAGATGA AGCCATTACT
TCAAAAATAA AATCAATTGC TTCTAGTATC AGATATTTTA CAAATAAAAA CGATATCTTA
GTAGAAAATT TAAAAACCGA TACCGATACT GTTCATTTAA CTATCTTAGA TAGCGATGAA
GCTAAAAAAA TAGATGAAAT GCTAAAAGGT ATTAAAGGCT TAGATATTAA AAAAGATGGT
TTAAATTATA GAATTTCTTT AACAGCGGCT GAAAAGATAG ATACGGCTAA ATATGCAGTA
GATCAAGCTG TTGAAACCAT AAGAAATAGA TTAGATCAAT TCGGTCTTGC CGAGCCTACC
GTAGCAAAAC AAGGTGAAAA TCAGATCTTA GTCGAGCTTC CCGGTATAAA AACTGCCGCC
GATGAACAAA GAGCTAAAGA TCTTATAGCT AAATCAGCAC ATCTTCAGCT TATGGCTCTT
GATGAAAAGA GGCAAGATCA AGCAAATAAA ATGACTGAAG CCGAAGCGAC TGCTTATGGA
GATGTACTTT ACCCCGATGT AAAAAATCCT AAATTTAAAT ATCTCATAAA AGATATTCCT
GTGCTTGATG GAAATATGTT AGTTGATGCA AGAGTTGCAT TTGATAATCA GACGAATTCT
CCCATCATAA GTTTTACTTT AAATGCTGAA GGTGCTAGAA TATTCGGTGA TTTTACAGGA
TCAAATGTTG GAAAACGTCT TGCTATAGTG CTTGATGGTA AGGTATATTC AGCTCCGGTT
ATAAATGAAA GAATTGGTGG TGGAAGCGGT CAGATAAGTG GAGGATTTAG CGTAGAAGAG
GCTCACGATG TTGCCATAGC TCTTAGAAGC GGTGCACTTT TAGCTCCTGT TAATATGCTA
GAAAAAAGAA GTATAGGACC TAGTTTAGGA CAACAAAGCA TAGATCAAAG TATGGTAGCG
CTAGCTGGCG GAGCTATTTT GGTTGTTTTA TTTATGGTGC TTATTTATGG ACTTGCCGGA
GTTTTGGCAA ATATAGCTTT AGTAGTAAAC ATATTACTTT TAGTGGCCGT GATGGCTCTT
TTTGGAGCTA CTTTGACTTT GCCGGGTATG GCTGGAATTT TGCTTACTAT AGGTATGGCA
GTAGATGCTA ATGTTATCAT AAATGAACGG ATACGAGAAC TTTTAAAAGC CGGTCAGAGC
GTTCACGTTA GTATAGAGAA AGGTTATAAA AACGCTATGA GCGCGATAAT CGATTCAAAT
TTAACCACGC TCATAACTTC AGCTGCTTTA TATGCTTATG GAACAGGTCC AGTTAAAGGA
TTTGCCGTTA CTATGAGTAT AGGTATTTTG GCATCTATGT TAACTGCTAT ATTAGGAACT
CATGGTATGT TTGAGTTTTT AGGTAAAAAG ATAGAAAATA ATAAAAACAG CGTGCTGTGG
TTTGGATATA AGATAAGAAA GGTAGCTTAA
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| Protein sequence | MLKGRVTYRL VIFILALIFG LGFSMPSFLQ SEKGYKISLG LDLQGGLHML LGVQTDEAIT
SKIKSIASSI RYFTNKNDIL VENLKTDTDT VHLTILDSDE AKKIDEMLKG IKGLDIKKDG
LNYRISLTAA EKIDTAKYAV DQAVETIRNR LDQFGLAEPT VAKQGENQIL VELPGIKTAA
DEQRAKDLIA KSAHLQLMAL DEKRQDQANK MTEAEATAYG DVLYPDVKNP KFKYLIKDIP
VLDGNMLVDA RVAFDNQTNS PIISFTLNAE GARIFGDFTG SNVGKRLAIV LDGKVYSAPV
INERIGGGSG QISGGFSVEE AHDVAIALRS GALLAPVNML EKRSIGPSLG QQSIDQSMVA
LAGGAILVVL FMVLIYGLAG VLANIALVVN ILLLVAVMAL FGATLTLPGM AGILLTIGMA
VDANVIINER IRELLKAGQS VHVSIEKGYK NAMSAIIDSN LTTLITSAAL YAYGTGPVKG
FAVTMSIGIL ASMLTAILGT HGMFEFLGKK IENNKNSVLW FGYKIRKVA
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