Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0267 |
Symbol | fliF |
ID | 4538405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 241756 |
End bp | 243462 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639745664 |
Product | flagellar MS-ring protein |
Protein accession | YP_891471 |
Protein GI | 118475241 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACA AGACTCTATT TCATCAAGTC GGTCAGCTAT ATCAAAATCT TACGCTAAAA CAGAAGATTG TAGCAGCTAG CAGTGTTGTT ATAGTGGTTG GATTTTTAGT ATTTTTAAGC CTATATAAAA GCAGCAGCTC TGGATCTGAG TATGACGGAT ACAGCATACT ATTTAGAAAT TTAAATCCCG CCGACTCAGC TCAAATAATA GCTCAACTAG AAAAAGATGG AGTAACTTAT AAATTAGCAA ATGAAGGCAC TATATTAGTT CCTACTAAAA GCGTTTATAA AGAGAGAATA GCAGTAGCAA GCCTTGGGAT AATGAAAGAC GGTAAAAACG GTTTTGAGAT ATTTGATAAA CAAGATTTCG GCGCTACTGA TAATGAGCAA AGAGTTAAGT TTCAAAGAGC CATTCAAGGA GAACTTTCAA AGACGATAGA AGGTCTTGAA CCCATAGAAA AAGCTACTGT TTATATCGCA TTTCCTAAAG ATAGCGTATT TACGGAAAGA CAAGTACCGC CGACTGCTTC AGTAGTAGTA AAGATAAAAG ACGGTGAAAA ACTAAATAGA AAACAGATAG ACGGTATAAA AAGGATAGTA GCTGGATCAG TTACAAATTT AAAAGCCGAA GATGTGAAAA TAGTCACTCA AGACGGAGTA GCAGTAGGGG ATGACGAAAT AGCTTTAGAA AGTGAATTAG TAGCTTCACA AATAAAATAT AAAAAAGAAT TTGAAAATAC ATATGAGCAA AAAATTATTG ATATGATAGG AAAATTCACA GGCGGAAGAG ATAAAGTAAC TGCAAAAGTC AGCATAGAGT TTGACTTTTC CGTAAAAGAT AGTCAAAGTG AAATTTATGA TCCAAACTCC GTAATAAGAA GCGAACAAAA TATAGAAGAA AAAAGAGAGG GAAAACAGCC AAAAGAAGTT GGTGGAGTTC CAGGAGCAGT TAGCAATATA GGGCCAGTAG AAGGCTTAGA TCAAAATAAA CCAGATGAGT TATACACAAA AAACGTAGCT AATACAAACT ATGAAATATC TAAAAAAATT ATCAAAGTCA AAGATCAATA TGCAACAATA AAAAGAGTGA CCGCAGCTGT TGTCGTAGAT GGAAAGTATG AAAGAGAGAA GAAAGAAGAC GGTAGTTTAA GCGATACAAT AGCTTATGTG CCTCTAAGCG AAGATGAGAT AAATAAGATA AAATCTCTAG TTGAACAAAC TATCGGTTAC AACTCGACAA GAGGAGATGA AGTCACAGTT AGCAATTTTG AATTTAAAAA AGCCGGAAAT TTAAATGCAA ATACGACAAA AATAGGAATA TTTTATGACT CATACCTAAA ACCTCTAACT CCGATAATTA AATATCTTAT AGTGCTGCTT ATACTATTTG TATTTTATAA AAAAGTCATT ACTCCATTCT TGCAAAAAAT GGTCGAAAAT GCTAAAGATG AAGACTTTGA GCCGCAAAAA GAAGAGAGTA ATATAGAAGA AGAAGCCGAA GATACTTTGG AAAAATTCAA AGCCGCAAGA AAAAGAGTTG AAGATGAGCT TGGTATCGGA GAGGATTTCA ACGAAGATGA ATTAAAATAT GAGGTATTGC TAGAAAAAAT GAAACTTATA GTATCTGAAA GAAGCGAAGA AATATCAACT CTTCTTCAAG GAATGATAAA AAATGACTCA GACTTCAACT CGCGTAAGGA GTTTTGA
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Protein sequence | MDYKTLFHQV GQLYQNLTLK QKIVAASSVV IVVGFLVFLS LYKSSSSGSE YDGYSILFRN LNPADSAQII AQLEKDGVTY KLANEGTILV PTKSVYKERI AVASLGIMKD GKNGFEIFDK QDFGATDNEQ RVKFQRAIQG ELSKTIEGLE PIEKATVYIA FPKDSVFTER QVPPTASVVV KIKDGEKLNR KQIDGIKRIV AGSVTNLKAE DVKIVTQDGV AVGDDEIALE SELVASQIKY KKEFENTYEQ KIIDMIGKFT GGRDKVTAKV SIEFDFSVKD SQSEIYDPNS VIRSEQNIEE KREGKQPKEV GGVPGAVSNI GPVEGLDQNK PDELYTKNVA NTNYEISKKI IKVKDQYATI KRVTAAVVVD GKYEREKKED GSLSDTIAYV PLSEDEINKI KSLVEQTIGY NSTRGDEVTV SNFEFKKAGN LNANTTKIGI FYDSYLKPLT PIIKYLIVLL ILFVFYKKVI TPFLQKMVEN AKDEDFEPQK EESNIEEEAE DTLEKFKAAR KRVEDELGIG EDFNEDELKY EVLLEKMKLI VSERSEEIST LLQGMIKNDS DFNSRKEF
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