| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0128 |
|---|
| Symbol | |
|---|
| ID | 4538614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 108880 |
|---|
| End bp | 110355 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639745526 |
|---|
| Product | hydrogenase-4 component F |
|---|
| Protein accession | YP_891338 |
|---|
| Protein GI | 118475333 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.223921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT TATTTTTAAT TCTACTGCTT CCTTTGGTAT CGGCTCTCAT TTTATTTGTA
TCTCCTTTAA ATGTAAAAGT TTTAAACCTT TTGCATATAC TTTGCAGCGC CGCAGTATCT
TTAGCACTAC TTTGTTCTAT AAGTAAAGTT TTAAGCTTAG GTGCCATATA TGCATTTAAC
GATATGTTGT TTTTAGACTC TTTAGGAGCT GTTTTTTTAG TACTTATAAG TTTGACTGGA
TTTTGTGTAA ATTTATACTC GACTAGCTAT TTTAAGTGGC AGTTAAACTC AAATTCTTTA
AATTTAAAAC AGATAAAAAC AAATTTCTGT TTATCTCATA TAACCACGTT TGCTATGACT
CTAAGCTGTA TTAGCAATAA TATGGCGATA ATGTGGGCCG CTCTCGAAGC AACCACTTTA
GCAACGGTAT TTATGGTGGC GCTAAAAGGT GATAAACGCT CACTTGAAAG CGGATACAAA
TATATAATCA TCTGCTCGGT CGGCTTAGCA TTTGCTATGT TTGCGACCAT ACTTTTGTAC
GCTTCTAGTT TAAATACTTT ACATGATGAG AAAAATGCGA TTTTGTTTTC AAATTTAATA
CTTCACGCAA GTAGCTTAAA TCCCGATGTT TTAAAACTTA TATTTATATT TGCTTTAATC
GGTTTTGGAA CAAAAGCGGG CTTAGTGCCT ACTCATACTT GGCTCCCTGA TGCTCACGCT
CAGGGTCCAG CTCCAACTTC AGCTATGCTT AGCGGAATCG TTATAAAATG CGCCATGTTA
GGACTTTTGC GTTACTACGC TATCGCTTCA AATGCAACCG GAGGTAATTT TAGCGAACAA
ATAATGTTGA TAAGCGGTAC ATTAACGCTT TTCGTATCTG CGTTTTTTCT TATCAGACAA
CATGATGTAA AAAGAATGTT CGCTTACCAT TCAGTAGCAC ATATGGGAGT TATAGCTTTT
GCTCTTGGAG TCGGTGGAAA AATAGGCGTT TTTGCAGCCG TTTTCCACTG TGCGGCTCAC
AGCTTTACAA AAGCTTTAGC ATTCCTAACC ACAGGAAACA CTGCTAGAAT TTACGGGACA
AACGATATGA GTAAAATGGG GTGTATGATA CATATCGCTC CGCTCACAAC CGTTTTGTTT
GGCATATCTA TCTGCTCACT CGTAGGAGTT CCTGGTTTTG CTATCTTTGT AAGTGAGTTT
TTGACGTTTA AAGCCGCTGT TTTAAGCGGT CAGTACGCTG CTATCGTATT ATTTGCGCTG
GCTTTAACTA TCATCTTTAT AGCCGATTTT TCACATTTTT TTATGGCAAG TTTTGGTGAA
GTTAAAGGTG AAGTTAAATT TAAATCAGAA ATGAGTTTAT GGGAAAATTT ACCGCTTATC
GCATTAGCAT TTTTGATAAT CAGCTTTGGC ATATGGCAGT TTGATAACTT TTGGATATTA
GTACAAAACA GCGTCACAAT GATAAAAGGA AACTAA
|
|---|
| Protein sequence | MDILFLILLL PLVSALILFV SPLNVKVLNL LHILCSAAVS LALLCSISKV LSLGAIYAFN
DMLFLDSLGA VFLVLISLTG FCVNLYSTSY FKWQLNSNSL NLKQIKTNFC LSHITTFAMT
LSCISNNMAI MWAALEATTL ATVFMVALKG DKRSLESGYK YIIICSVGLA FAMFATILLY
ASSLNTLHDE KNAILFSNLI LHASSLNPDV LKLIFIFALI GFGTKAGLVP THTWLPDAHA
QGPAPTSAML SGIVIKCAML GLLRYYAIAS NATGGNFSEQ IMLISGTLTL FVSAFFLIRQ
HDVKRMFAYH SVAHMGVIAF ALGVGGKIGV FAAVFHCAAH SFTKALAFLT TGNTARIYGT
NDMSKMGCMI HIAPLTTVLF GISICSLVGV PGFAIFVSEF LTFKAAVLSG QYAAIVLFAL
ALTIIFIADF SHFFMASFGE VKGEVKFKSE MSLWENLPLI ALAFLIISFG IWQFDNFWIL
VQNSVTMIKG N
|
|---|
| |