Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_2085 |
Symbol | recJ |
ID | 5407730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1946028 |
End bp | 1947605 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640873434 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001409209 |
Protein GI | 154173842 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0350737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAGTA AGGAAGATAT CAGGAATTTA TTGGAGCTTA GATTTAGTAA CGATATCCAC AAAAAGCTTT CGCAAATTCC TACTCCAAGC GCCCTAAAGG ACATCTTTAA AGGCGCGATG CGTATCAAAG AGGCGATGCA AAAAGACGAG CTCATAGTCA TCGTCGGGGA CTATGATGTC GATGGTGTCG TCTCTAGCGT GATACTGGCA GAATTTTTTG ACGATCTGGG GGTTGGCAAC TATCAGGTGC GTATCCCAAA TCGCTTCAAG GATGGCTACG GTCTAAATCC GGATATCATC GAAGAGCTAG ATGAAAACGT AAAGCTCATC ATCACTGTCG ACAACGGCAT CAGCGCGAAC GATGCGGCGC AAATTTGCAA AGCACGCGGC ATCGATCTCA TCATCACCGA TCATCACATG CCCCCGCCCG TGATGCCAGA AGCCTACGCG ATCATCAACC CAAAGCAGCC CGGCTGCACC TTCCCAAATA TCGAAATTTG CGGCGCTGAG GTAGCGTGGT ATCTAGCCGG TGCGCTAAAG GATGTGTGTA AGCTAAACAA CTACGATATG AGTAAATTCC TGGAGCTTTT AGCTATCGCC ATAATCGCCG ATATGATGGA GCTTCGCGAT ATGAATAGGA TGTTGGTGCG ACTGGGACTA AACAGACTAA ATAGCTCCAA ACGAGCCGCA TTTCGCGCGA TAAAGGAATT TTACGGTAAG GATAAATTTG AGTGCGACGA TATCAGCTTT CTCATCGCTC CTCTCATAAA TTCCGCCGGG CGTATGGACG ATGCGATGAA TTCGTTTGAT TTCTTACGCG CAAAGACAAT TGATAAGGCG TATGATTATC TTGACATGAT AATCGACTTT AATAACTCCC GTAAGGAGGA GGAGCGTGCA CTTTTTGAAT GCTCGTTAAA GGACGTGAGG GATGATGACG AGATCATCGT CACGTGGGGT GAGCAGTGGC ACGAGGGCGT CATCGGCATC GTAGCGAGCC GCTTGGCAAA GCACTTCTCA AAGCCGGCTA TCGTTTTTAG CATAGACAGA GGTAGAGCCA AGGGCAGTGC CAGAAGCATA GGCAAGCTCG ATATCCTCGC ACTCATCGCA AAGCATGAAG ACCTGCTAAA CAGCTACGGC GGGCATAAAG GCGCGGCCGG CCTTGTGATC GCGCCTGAGA ATTTGCAGAA ATTTAAAGAG GAGATAAACA AAAGCTGCTT TTTGATGGAT CTGCACCAGT TTGCCAGCTC GGACGAGCTT TTAGGCGATA TAAGCGCCAA AGAGATCGAC TTTGAGCTAC TTGAAATTTT GGAGCTTTAC GAGCCATACG GGCAGAAAAA TCCGCGCCCG ATATTTAGGA TCGACGGTGC TGTCGTCAAA AACGAAAAGC TGATCGGCCG CGATCAAAAT CACCTCAAGC TCATATTGCA AAAAGACGAC AAGACCCTTG AGGCGCTGTT TTTTAACTTC ACGCGCCACG TCAAAGTCGG TGAGAGCATA AACATCATCT TTTCTATCTC TAAAAATTCA TTTCGCGGGC TTGTCACGCC ACAGCTTTTG ATAAGAGAAG TTTTGTAA
|
Protein sequence | MLSKEDIRNL LELRFSNDIH KKLSQIPTPS ALKDIFKGAM RIKEAMQKDE LIVIVGDYDV DGVVSSVILA EFFDDLGVGN YQVRIPNRFK DGYGLNPDII EELDENVKLI ITVDNGISAN DAAQICKARG IDLIITDHHM PPPVMPEAYA IINPKQPGCT FPNIEICGAE VAWYLAGALK DVCKLNNYDM SKFLELLAIA IIADMMELRD MNRMLVRLGL NRLNSSKRAA FRAIKEFYGK DKFECDDISF LIAPLINSAG RMDDAMNSFD FLRAKTIDKA YDYLDMIIDF NNSRKEEERA LFECSLKDVR DDDEIIVTWG EQWHEGVIGI VASRLAKHFS KPAIVFSIDR GRAKGSARSI GKLDILALIA KHEDLLNSYG GHKGAAGLVI APENLQKFKE EINKSCFLMD LHQFASSDEL LGDISAKEID FELLEILELY EPYGQKNPRP IFRIDGAVVK NEKLIGRDQN HLKLILQKDD KTLEALFFNF TRHVKVGESI NIIFSISKNS FRGLVTPQLL IREVL
|
| |