Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_2046 |
Symbol | typA |
ID | 5406492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 11866 |
End bp | 13668 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640871471 |
Product | GTP-binding protein TypA/BipA |
Protein accession | YP_001407314 |
Protein GI | 154175347 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0433299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAAGA TACGAAATAT CGCCGTCATA GCTCACGTCG ATCATGGCAA GACTACGATG GTCGATGAAC TTTTGAAACA ATCAGGAACA TTTAACGAGC ACCAAAGCAT CGGCGAGCGC GTCATGGACA GCAACGATAT CGAGCGCGAG CGCGGCATCA CGATACTTTC TAAAAATACC GCCATACGTT ACAAAGATAC CAAAATAAAT ATCATCGACA CCCCGGGACA CGCCGATTTT GGCGGCGAGG TCGAGCGCGT GCTAAAAATG GTCGATGGCG TCTTGCTGCT AGTCGATGCG CAAGAAGGCG TCATGCCTCA GACTAAATTC GTAGTCAAAA AGGCGCTTTC TTTGGGACTT TGTCCGATCG TCGTGATAAA CAAGATAGAT AAACCTGCAG GCGATCCTGA CCGCGTAGTA AATGAAATTT TCGATCTTTT CGTCGCGCTT GAGGCAAATG ACGACCAGCT TGAATTCCCA GTCGTTTATG CTGCGGCTAA AAACGGCTAC GCAAAGCTAG ATTTAAGCGA TGAGAACATC GATATGAAGC CACTTTTTGA GACTATCCTC TCTCACGTGC CGGCACCAAG CGGCAGTGAC GAAAATCCGC TTCAGCTTCA AGTTTTCACG CTTGATTATG ACAACTATGT CGGCAAGATC GGTATCGCGC GTATCTTTAA CGGCAGAATT TCAAAAAATC AAAACGTGAC TTTGATGAAA GCCGACGGCA GCAAGACAAA CGGCAGAATT TCAAAGCTCA TCGGCTTTTT AGGCCTTGAC AGACAAGACA TCAATGAAGC CGGCACGGGC GATATAGTCG CGATCGCGGG CTTCGAGGCG CTTGACGTGG GTGATAGTGT CGTCGATCCT AGCAACCCTA TGCCGCTTGA TCCGCTTCAT ATCGAGGAGC CGACTCTAAG CGTCGTTTTT AGCGTAAACG ACGGACCACT TGCAGGCACC GAGGGTAAGC ACGTGACCTC AAATAAGTTA GACGAGCGAT TACAAAACGA GATGAAAACC AATATCGCGA TGAAGTATGA AAACATCGGC GAGGGCAAAT TTAAGGTAAG TGGCCGTGGT GAGCTTCAGA TAACGATCCT AGCGGAAAAT ATGCGCCGCG AAGGGTATGA ATTTTTACTT GGGCGTCCGG AAGTCATCGT AAGAGAGATA AACGGCGTCA AATGCGAGCC TTTCGAGCAT TTAGTCATCG ACGCACCGGA TGATTGCACC GGCACTGTCA TCGAAAAGCT AGGCAAAAGA AAGGCCGAGA TGACCTCGAT GAATCCGACC GGCGACGGGC AGACCAGGAT AGAATTTGAG ATTCCGGCTC GCGGGCTCAT CGGCTTTAGA AGCCAGTTTT TGACCGATAC TAAGGGCGAG GGCGTGATGA ATCATAGCTT TTTGGAATTT CGCCCGCTAA GCGGAACGGT CGAGCACCGA ACCAACGGCG CGCTGGTATC GATGGAAAAC GGCGTCACGC TAGCGTATTC GCTATTTAAC TTACAAGATC GCGGTGTATT ATTTTTAGAC CCGCAGGCAA AGGTCTATGT GGGTATGATC ATCGGCGAGC ACAGCCGTCC AAACGACCTT GACGTAAACC CTATAAAAGG CAAGAACCTG ACCAATGTGC GCGCCAGCGG CTCGGACGAT GCGATCAAGC TCGTGCCGCC TAGAAAGCTG AGTCTTGAGC GCGCGCTTGA GTGGATAGAG GATGACGAGC TAGTCGAGGT CACGCCCCTA AATATACGCG TTCGTAAGCG CTATCTCGAC CCTACTCAGC GCAGAAGAAT GGCAAAAATA TAA
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Protein sequence | MEKIRNIAVI AHVDHGKTTM VDELLKQSGT FNEHQSIGER VMDSNDIERE RGITILSKNT AIRYKDTKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL CPIVVINKID KPAGDPDRVV NEIFDLFVAL EANDDQLEFP VVYAAAKNGY AKLDLSDENI DMKPLFETIL SHVPAPSGSD ENPLQLQVFT LDYDNYVGKI GIARIFNGRI SKNQNVTLMK ADGSKTNGRI SKLIGFLGLD RQDINEAGTG DIVAIAGFEA LDVGDSVVDP SNPMPLDPLH IEEPTLSVVF SVNDGPLAGT EGKHVTSNKL DERLQNEMKT NIAMKYENIG EGKFKVSGRG ELQITILAEN MRREGYEFLL GRPEVIVREI NGVKCEPFEH LVIDAPDDCT GTVIEKLGKR KAEMTSMNPT GDGQTRIEFE IPARGLIGFR SQFLTDTKGE GVMNHSFLEF RPLSGTVEHR TNGALVSMEN GVTLAYSLFN LQDRGVLFLD PQAKVYVGMI IGEHSRPNDL DVNPIKGKNL TNVRASGSDD AIKLVPPRKL SLERALEWIE DDELVEVTPL NIRVRKRYLD PTQRRRMAKI
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