| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1484 |
|---|
| Symbol | |
|---|
| ID | 5406344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 123620 |
|---|
| End bp | 126040 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640871584 |
|---|
| Product | putative diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_001407426 |
|---|
| Protein GI | 154174527 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.017291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTC GTCAAATTAA AATTTTCGCT TTTGTACTGG CGGTGGTATT TGGCGTGTGC
GCGTTTTTCA TCTATAAAAC GAACAAGGCC TTGAGCGTGA GCGGGGAATT CAACAACGCT
CTTATAAATT TAAAGCTTGC AAACGACGAG ATGAATTTCA ACCTCGAAAA TAACATACTC
GTGCTTAATT ACGACGAGCT CAACAAAAAC GCCAAAAATT TCGACAGGAA TTTAACGAGG
CTTTTGGCGT TAAATGAGCA AAATTTAGGG CTTGGCCTGC ATGATAACGC GGACAAGCTA
AAAGAGCTTG GCGAAATTTA CACCAAAAAA CGTAGGTTCG TCGATAGATC AAACTACGTT
AGCTCTGGCA TGGCGGCGTT TATCATAGCC GGCGAATACG AAATAGACAA AGACCCCGAG
CTAAAAGCGT TCAAGCCTTT GTTTTTGACG ATAAGAAATA TGATCAGATT TGATCTGCAA
ACCGTCAAAC AAGCCCAGTC GCAGATAGAT GAGATGTCCG GGCTAAGCGA GCAAAACGCC
AAACAGTCCA ATATGCTAAA AAAGGCCAAA TACGCGCTAA ATTCCATGAT CTTGCTAAAT
ACGATCTACA CTCAAAGCGC CCAGCTCGGG CTTGGTAAAT TTATAGAAAA TTTTAGACGC
GAAAATCTCA TTTGGTATAA AGAGGTGTTT GATAGGCTGA AATTCTTGCA AAGCGTGGCT
TTCGTTTTGT TCTTTTGGCT ACTGGCGTTT ATATTTTATC AAGCAAGACA AAGCGTGAGA
AATTTGCGCC AGATAAAGCT TTTAAAAACG ACGATAGACG GCGGGCATAG CTCGATAGTG
TTTTCGGACG TGCAAAATAA AATTTTATAC GTGAATAAAA CGTTTGAAGA GACGACCGGG
TATAAACTAA AAGAGGTAAA AGGCAAAAAT CCTCACGTGC TAAAATCCGG CATGCACCCA
GAAAGCTTTT ACGAGAGCAT GCGAGAGGCG ATAAGGACGG CGAATTTTTG GGAGAGCGAC
GAGCTCATCA GTAAGGCCAA AGATGGAAAC CTCATCTATG AAAAGGCTAA ATTTATCCCG
TTTTTCTTTC GCTCTAAGCT CGAAGGATAT ATCGCCATCA AGCTAAACAG GACCAAAGAG
GCCATAATGC TAAACGAACT CGCGGTCAAA AACGAGCAGA TAAAGGCGCA GTCGGCGATC
GATAAGCTCA CTGGCTTTGG CAATTATTTC GCGCTGACTA AAAATTTAGA GGCCAAAAAG
GACGGCATGC TTATTTGCAT GAGTATCAAA AATTTCAAAA CACTTAGATT TTTCTATCAA
ACCAGGATCA TCGACGCCAT GCTAAAAGCG ATCGCCGATA CGCTAAAGCT ATGCGTGGAT
ACCTCGCAGA TAAACGCTTG GCTCTTTCGC TTTCAAGATG ATGCGTTTTA CCTTTGGTAT
AACGGGGATA ATATCGTCCG AGACATCGGC TTTATCAAGG AGTATTTTAG CTTCAACAGG
CTTGAGGTGA TGATAGATGA TAAGCACGAG AGCTTGCCAA GCCCCAAAAT AGTCATGGGC
GTATCTTTGC CAAACGACAC GCCTCAGACT AATCGCTTGA TGCAGGCTAT CTTGGCAAAT
CAACAAGCCC TGGATAACGG CAGCGGAATT TACTACTATC AAGAAAACGA CGCCATCGAG
ATGCAGTACC ACAAGAACCA GCTCACCACT CAGCTAGTAG AATACGCCCT TGAAAACGAT
ATGGTGATCG TCGAGTGTCA GGGCATTTAT GATGTAGAGG CGAACGAAAA AGAGGCGAAA
TTTTACGAAG TCTTGGTGCG CATAATGGAT CAAAACGGCA AGATCCGCTA TCCGGGTGAA
TTTTTAGAGA TCGCCATGAG GACGCAACTA TATGTGCAAA TAACCAAAAA GGTCATCGCT
CACGCCTTTG CCCTCGTCGA AAAATACCCG CAATACATAT TTTCTATAAA CCTTTCAAGC
TCCGATATCG CCGATCGCTC CGTCAGAAAG CTACTGGAAG AAAAGCTAAG CGCATGCGCA
AATCCCGCTC ACGTATGCTT TGAGATGCTA GAAAGCGAGG AAATGAGCGA TTATGAAGGC
ATAAATTCTT TCATAAAGCG CGTGAAAAGC TACGGATGTA AAATTTCGAT CGATGATTTT
GGCTCGGGGT ATTCAAACTA TTACCGAATT TTGGAGCTTG ACATCGATAA CATCAAGATA
GACGGCTCGA TAATCAAAAA GCTGCCGTAT GATCAAAACG CGGGCGTCCT GGTCGAAACC
ATCGTAAATT TTGCTAAAAA GCAGGGCTAC AAGGTCGTAG CGGAGTTTGT GAGCTCGCCT
GAAATTTTAA CCAAGGTGCA GGAATTTGGC ATCAAATACG CACAAGGCTT CTTACTGGGC
AAGCCAAAGT CGATGAGCTA G
|
|---|
| Protein sequence | MNLRQIKIFA FVLAVVFGVC AFFIYKTNKA LSVSGEFNNA LINLKLANDE MNFNLENNIL
VLNYDELNKN AKNFDRNLTR LLALNEQNLG LGLHDNADKL KELGEIYTKK RRFVDRSNYV
SSGMAAFIIA GEYEIDKDPE LKAFKPLFLT IRNMIRFDLQ TVKQAQSQID EMSGLSEQNA
KQSNMLKKAK YALNSMILLN TIYTQSAQLG LGKFIENFRR ENLIWYKEVF DRLKFLQSVA
FVLFFWLLAF IFYQARQSVR NLRQIKLLKT TIDGGHSSIV FSDVQNKILY VNKTFEETTG
YKLKEVKGKN PHVLKSGMHP ESFYESMREA IRTANFWESD ELISKAKDGN LIYEKAKFIP
FFFRSKLEGY IAIKLNRTKE AIMLNELAVK NEQIKAQSAI DKLTGFGNYF ALTKNLEAKK
DGMLICMSIK NFKTLRFFYQ TRIIDAMLKA IADTLKLCVD TSQINAWLFR FQDDAFYLWY
NGDNIVRDIG FIKEYFSFNR LEVMIDDKHE SLPSPKIVMG VSLPNDTPQT NRLMQAILAN
QQALDNGSGI YYYQENDAIE MQYHKNQLTT QLVEYALEND MVIVECQGIY DVEANEKEAK
FYEVLVRIMD QNGKIRYPGE FLEIAMRTQL YVQITKKVIA HAFALVEKYP QYIFSINLSS
SDIADRSVRK LLEEKLSACA NPAHVCFEML ESEEMSDYEG INSFIKRVKS YGCKISIDDF
GSGYSNYYRI LELDIDNIKI DGSIIKKLPY DQNAGVLVET IVNFAKKQGY KVVAEFVSSP
EILTKVQEFG IKYAQGFLLG KPKSMS
|
|---|
| |