Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1141 |
Symbol | |
ID | 5406790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 926494 |
End bp | 928254 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640872385 |
Product | lipid A export ATP-binding/permease protein MsbA |
Protein accession | YP_001408205 |
Protein GI | 154174697 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAGAAA ATTTAAAATT TGGGATACGA ATGAGTAAAA AAGAGCTGAA ACTAAGAGAT ATTTTGAGGC GTTTCGCCCC GTATTTTCGG GACTACATCC CCTATTTCGT GATCGCATTC GTGGGGATGT TGCTAGCTAG CGGAGGCACG GCGGCGACTG CATATATGGT AAAGCCCGTG CTAAATGAAA TTTTCATCGA AAAAGAAAAA ACATGGCTTT ATCTGCTGCC CCTTGGCATC GTGATAGTCT ATGTCGCTAA GAATTTAGGC ACATTTTTAC AAGCCTACTA TACCGCCTAC ATCGGTCAGG ACGTCATCCG TCGCTTTCGC GAAAAGATGC TTCAAAATTT ACTCAGCCTT GATATGAAAT TTTTCAACAC TTACCGCACC GGCGAGCTGA TAAGCCGCAC GACAAACGAC ATCGACCGTA TCCGCGCGAT AGTATCCACC ATGGTGCCAG AATTCATCCG CGAGTCGCTT ACTATCGTGG GGCTTCTTGG CGTTGTCATC TATCAAAGCC CAAAGTTAGC GTTTTTCGCT ATCATCGTCC TACCTGCCGC ACTTTATCCG ATCTCGCGAC TAGCCAAAAA GATGAAAAAG ATCTCCACCG CATCGCAAGA AAAGACCTCG GACATCACCT CGGCGCTAAG TGAAATTTTC ACAAATATCG AGATCATAAA GGCAAACAAC GCCCAAAACT ACGAGCATGA GCGCTTTACC AGCGAAAACG ATAAATTTTT CAAGCTAAAT TTAAAAAGCA CCAAGGTCGA ACAGCTGGTC AGCCCGCTTA TGGAGACGAT AGGCTCTATC GGCGTCGCGG CAGTCATTAT CATAGGCGGT AGCGACGTGA TCGACGGATA CATGGACGTA GGCGAGTTTT TCTCGTTTAT CGCGGCACTT TTCATGATCT ATACGCCGCT AAAACGCATA GTCAATATCT ACAACAAAAT GCAAGATGTG GCGGCTGCGA GCGAGAGGAC GTTTGAGCTT ATAGATGCCG TGCCTGAAAT AAAAGACGGC CAAAAGGAAA TTTCAAACGA CATAAGCTTG ATAAAATTTG AAGACGTGAG GCTAAGCTAC GACGAAAAAG AGGTGCTAAA AGGTGTAAAT TTCGAGGCTA AAAAGTCCGA GCTCATTGCT CTTGTAGGCT CAAGCGGCGG AGGCAAGACC TCGCTTATGA ATTTATTGAT GAGATTTTAC GATACAAGCG GCGGCAAAAT TTTGATAAAC GGCACCGATT TAAAAGATAT AGAAATTCAC TCTCTGCGCC AAAATATCGG GCTGGTGACG CAGCGCGTGT ATATCTTTAA CGATACGGTC GCTAAAAACG TCGCTTACGG TAGAGAATTT AGCGAAGAAG CGGTCATCAA AGCCCTAAAA CTAGCCAATG CTTACGACTT TGTAAGCGCA CTTGAAAACG GGATAAACGC GGTGCTGAAT GAATTTGGCA CGAACCTCTC CGGCGGTCAG CGTCAGCGCA TAGCCATCGC GCGCGCACTT TACTCGAACC CGCAAATTTT GATATTTGAC GAAGCCACCA GCGCACTTGA TAACGAGAGC GAAAAAGAGA TAACAAACGC GATAAACAAT CTTCATCATG AAAAGATAAT CTTCGTCATA GCTCACCGCC TAAGCACCGT CCAAAATGCC GACAAGATCG CGGTTTTAGA CGGCGGCAGG ATAGTAGGCT TTGGTAAAGA CAGCGAGCTT GAAAACGAAT GTGAAATTTA TGCAAAGCTT AAAGGCAAAG CCTTGGTTTA A
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Protein sequence | MGENLKFGIR MSKKELKLRD ILRRFAPYFR DYIPYFVIAF VGMLLASGGT AATAYMVKPV LNEIFIEKEK TWLYLLPLGI VIVYVAKNLG TFLQAYYTAY IGQDVIRRFR EKMLQNLLSL DMKFFNTYRT GELISRTTND IDRIRAIVST MVPEFIRESL TIVGLLGVVI YQSPKLAFFA IIVLPAALYP ISRLAKKMKK ISTASQEKTS DITSALSEIF TNIEIIKANN AQNYEHERFT SENDKFFKLN LKSTKVEQLV SPLMETIGSI GVAAVIIIGG SDVIDGYMDV GEFFSFIAAL FMIYTPLKRI VNIYNKMQDV AAASERTFEL IDAVPEIKDG QKEISNDISL IKFEDVRLSY DEKEVLKGVN FEAKKSELIA LVGSSGGGKT SLMNLLMRFY DTSGGKILIN GTDLKDIEIH SLRQNIGLVT QRVYIFNDTV AKNVAYGREF SEEAVIKALK LANAYDFVSA LENGINAVLN EFGTNLSGGQ RQRIAIARAL YSNPQILIFD EATSALDNES EKEITNAINN LHHEKIIFVI AHRLSTVQNA DKIAVLDGGR IVGFGKDSEL ENECEIYAKL KGKALV
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