Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1110 |
Symbol | |
ID | 5405987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 64973 |
End bp | 67123 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640871521 |
Product | TonB-dependent receptor domain-containing protein |
Protein accession | YP_001407364 |
Protein GI | 154174721 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTAAAT TAAGCAAAGT TACCGCCATT ATTTTATTTG GCGTATCTTC TGCCACAGCA CAAATGGGGG GGGGGTCGGA CGTAAATTCT AAACGAACCG ACTCAAACAC GACCATCGCG ACAGTCAGGC TCGATACGGT CTCGATCATG GCAAATAGGA GCGAAACCGA TGTTGCAAAA TACGCAGGTC AGGTCAGTAT CTTAAATCAA AATGACTTGG TAAAATCGCC CTCTATCATC GAAGATCTAG GCTCCATTCC TGGTGTGCAG CTTGGAAATG ATTTTGGTCG GCAGGTTGGT CAGTATTTCA ACATCCGCGG CTTTGGCTAT CAAAGCGAAG CCCGCGTCAT CATCGAACAA GACGGTATCA AGCGCTCTGC ATCACTCTTT TCAAATCAAA TTTCAAGCTT TCGCGTCGAT AATGACTTGC TAAAACGCGT CGAAGTCGTA AAGGGTGCAT CATCTGTACT TCACGGCAGT GGCGCGATCG GCGGTATCGT TAGCATGCAG ACAAAAGGCG TAAATGACTT CATAAACCCG GGCAGCGACT ACGGCGTTAC GATAGGCCAT CGTCAAGAGA GCAATCACAT GAATTCAAAC CGCGCTGCTA TCGCTTTGCG ACCGGTAGAA AATTTCGGAT TTGTGCTTTA TGGCAAGCAC GCGGACTTTG GCACGATGAA AATGGCAAAG GACGGAAAGA GAACGGGCAT AAAGTATGCT ATAAACGATG AGCGCATAAA TACCGTCTTT GCAAAGACCG AGTGGGCGAT AACAGATGAA CACGCGATAG AGGCTAGTGT ATTTAATTAT CACGAAAATT TTATCAGCGG TTGGCAGTCG CTTTACTGGT CGGAGCCCGG AGCATTACCG ACGGTCGGAC GGCTAAAACA GCGCGATTAT AGCGTGATAT ATAAATATAC TCCGCTTAAT AACAACTGGG TAAATTTGTC GCTTCAGTAT TATAATGCAA GGGCTCAAAA CCATAGGATA AGATCTGGTA TCTTAAGACG CCAGCCGCTT TTAATTGATT ACGTCAATAA AGACGACAGA TGGGGGCTGA GGCTAAAAAA CGAGAGTGTT TTTGCCACGG GCTGGCTGGA GCATAGACTG GTAACCGGCG TTGATTACGA GCATAGGAAA GAAGACGCGA TATTTTTGTA TAACGGCGAA CCGTCTGACT TTGGCTCGTT TCCAAATTTT TACAAAGATC TTGGTATCTA CGCTCAAGAT GTCTTTGATG TGGGAAAATT TGAATTTACC CTTGGCGGGC GTTTTGATAA ATTTAAACGC GGTGTGAAGC TACCGGGCAG GAGCACGAGC TCGGAGTCGA GATTTTCGCC TAAATTTGCT CTTGCTTACG AGGTGCTCGA TGGTGTAAAT TTACTCGCCG GATACGCCGA GACCTTTAGA AGTCCTACGC CAAACGAGAC CTCTCCTATC GGTCCGCTAA ATCCTCACTA CTGGTATATG TCAAACCCTC AGCTAAAACC TGAGCTTGCA AAAGAATACG AGCTTGGCCT TTCTATCGAC AAACAAAATT TATTTGGCGA TGATGAGCTG TATTTTAAGG CGACTTACTA CAATGGCAAT ATCAAAGATA TGATAGCTTT GCAAGTAAAA CCTGGCAATC CGCCATTTGA TCCGGACGCA CCCAATAGGC GCTACGGTAT GTATGAAAAT GTCGATCACG CAAAGCGTCA TGGCATCGAG GTCGAGTCAA AATATGCCAT AAATAACCTC GTCTTCTCTC TAGGCTACGA CCACACTAAA ATTTACGATA AAGCAACCAA AAAGATACTC ACCGTCTATG CCGACAAGCT GACATTTGGT GCACTTTATA AATATCAGCC TTGGGGGCTT AGCATGGGTG CTGATGTGAC GCACTGGTTC AAACCTAATA ACGATGAAAA AGAATTCGTT TCACAGGGTG TGACCTACAA AAACAACGAC GAGACTTTCA CGATCGTAAA TTTAAAGGGC AAATGGGAGC CGAGAAATTT TGATAGCTAT TTGCTAAATA AAGGGCTTAA GATCAGCTTT GGTATAAATA ATCTCTTCAA TAAAGAATAC ATCTTTCCAA ACGGGTTAAA AAGGACCTCA AGAGTCGGCA AAGGTAGAAA TTTCTACGTC GATTTTGAAA AGACGTTTTA G
|
Protein sequence | MCKLSKVTAI ILFGVSSATA QMGGGSDVNS KRTDSNTTIA TVRLDTVSIM ANRSETDVAK YAGQVSILNQ NDLVKSPSII EDLGSIPGVQ LGNDFGRQVG QYFNIRGFGY QSEARVIIEQ DGIKRSASLF SNQISSFRVD NDLLKRVEVV KGASSVLHGS GAIGGIVSMQ TKGVNDFINP GSDYGVTIGH RQESNHMNSN RAAIALRPVE NFGFVLYGKH ADFGTMKMAK DGKRTGIKYA INDERINTVF AKTEWAITDE HAIEASVFNY HENFISGWQS LYWSEPGALP TVGRLKQRDY SVIYKYTPLN NNWVNLSLQY YNARAQNHRI RSGILRRQPL LIDYVNKDDR WGLRLKNESV FATGWLEHRL VTGVDYEHRK EDAIFLYNGE PSDFGSFPNF YKDLGIYAQD VFDVGKFEFT LGGRFDKFKR GVKLPGRSTS SESRFSPKFA LAYEVLDGVN LLAGYAETFR SPTPNETSPI GPLNPHYWYM SNPQLKPELA KEYELGLSID KQNLFGDDEL YFKATYYNGN IKDMIALQVK PGNPPFDPDA PNRRYGMYEN VDHAKRHGIE VESKYAINNL VFSLGYDHTK IYDKATKKIL TVYADKLTFG ALYKYQPWGL SMGADVTHWF KPNNDEKEFV SQGVTYKNND ETFTIVNLKG KWEPRNFDSY LLNKGLKISF GINNLFNKEY IFPNGLKRTS RVGKGRNFYV DFEKTF
|
| |